Gene Information

Name : Aave_0593 (Aave_0593)
Accession : YP_968971.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 649080 - 651206 bp
Length : 2127 bp
Strand : +
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGCCCGCTCCCGCGCCCAGTCCCGCCCAGAAAGCCCTCCAGAAGCTGGGACTGTCGCGCGACATCGACCTCGCGCTGCA
CCTGCCCCTGCGCTACGAGGACGAAACCCGCATCACCCCCCTGCGCAACGTGCGGGATGGCGACACGGCCCAGATCGAGG
CCACGGTCACGGCGAGCGAAGTGCAGTTGCGCCCGCGCCGCCAGCTGGTGGTGACGGTGGACGACGGCACGGGTACCTGC
GAGCTGCGCTTCTTCAGTTTCTATCCTTCCCACCAGAAGACCCTGGCCGTCGGAGCGCGCCTGCGCATCCGCGGTGAGGT
CAAGGGGGGCTTCTGGGGGCGGCAGATGCTGCATCCGGCGTTCCGGCTGGCGGGCGGCGAACTGCCCGCCGCCCTCACGC
CGGTCTATCCGACCACGGCCGGCCTGCCCCAGCCCTATCTGCGCCGGGCCATCGTGAGCGCCCTGCAGCGCGTAGACCTG
TCCGAAACCATCCCCCCGGGGCTGGAACCTCCGATCCCGCGGTTCCTGGGCGAGGGCGGCGGGGGCCGCTCCTGGTGGAC
GCTGCGCGACGCGCTGGTGTTCCTGCACCATCCCACACCCGACGTGGCCTTGGCCACGCTGGAGGACCACAGCCATCCTG
CCTGGCAGCGGCTGAAGGCCGAGGAACTGCTCGCGCAGCAGCTCTCGCAGCTGGAGGCCAAGCGCGAGCGCGACCGGCTG
CGCGCGCCGGTGCTGCGGCCCGCGCCGGGCGGGGAGGGGGGAGCCGCGCTGCACGAACGCCTGCTGGCCGCATTGCCCTT
CGGCCTGACCGCCGCCCAGCGGCGCGTGTGCGCCGAGATCGCGGCAGACCTCGCCCGCGCCGTGCCCATGCACCGGCTCC
TGCAGGGCGACGTGGGCTCGGGCAAGACCGTGGTGGCTGCGCTCTCGGCGGCCGTGTGCATGGATGCGGGCTGGCAGTGC
GCGCTCATGGCGCCCACCGAGATCCTGGCCGAACAGCACTTCCGCAAGCTCATCGGCTGGCTGGAGCCCCTGCTCGCGGC
CAGTGGACGGCGCGTGGCCTGGCTGGCTGGCGGCCAGAAGAAGAAGGAGCGCGCCGCCATGCTGGCGCTGGTGGAAAGCG
GCGAGGCGGCGCTGGTCGTGGGCACCCACGCGGTGATCCAGGAGCAGGTGCGCTTCCGCAACCTCGCGCTGGCCGTCATC
GACGAGCAGCACCGCTTCGGCGTGGCGCAGCGGCTCGCGCTGCGCCGCAAGCTCGCCGACCAGGGCATGGAGCCGCACCT
GCTGATGATGAGCGCCACGCCGATCCCGCGCACGCTCGCCATGAGCTACTACGCCGACCTCGACGTCTCCACCATCGACG
AGCTGCCCCCCGGCCGCACGCCCATCGTCACCAAACTGATCGCCGACAGCCGCAAGGACGAGGTCATCGAGCGCATCGGC
GCGCAGGTGGCGTCCGGCCGGCAGGTGTACTGGGTCTGCCCGCTCATCGAGGAGAGTGAGGCGCTGGACCTCTCCAACGC
CACCGCCACGCACCTGGAACTCAGCGAGGCCCTGCAGGGCGATCCGGCGCACGGGCAGGCGCCGGTCATGGTGGGCCTGC
TGCACTCCCGCATGCCCCCGGCCGAGAAGAAGGCCGTCATGGAACTGTTCACCGCCGGCACCATGGGCGTGCTCGTCTCC
ACCACGGTGATCGAGGTGGGCGTGGACGTGCCCAACGCATCGCTCATGGTGATCGAGCATGCCGAGCGGTTCGGCCTCTC
GCAGCTGCACCAGCTGCGCGGCCGCGTGGGCCGCGGGTCGGCGGCGTCGGCCTGCGTGCTGCTCTATTCGACGGGCGAGA
GCGGCCGGCTGGGCGAGACCGCGCGCGACCGCCTGCGGGCCATGGCGGAAACCCAGGATGGCTTCGAGATCGCGCGGCGC
GACCTGGAAATCCGCGGCCCCGGCGAATTCCTCGGCGCCCGCCAGTCCGGCGCGCCGATGCTGCGCTTCGCGGACCTCGC
CACCGACACCCTGCTGCTGGAGTGGGCGCGCGAGACGGCCCCGCGCATGCTCGACGGGCATCCCGGCGACGCGCGCCGCC
ATGTGGGCCGCTGGCTCGGCGGCAAGGCCGATTACCTCAAGGCCTGA

Protein sequence :
MPAPAPSPAQKALQKLGLSRDIDLALHLPLRYEDETRITPLRNVRDGDTAQIEATVTASEVQLRPRRQLVVTVDDGTGTC
ELRFFSFYPSHQKTLAVGARLRIRGEVKGGFWGRQMLHPAFRLAGGELPAALTPVYPTTAGLPQPYLRRAIVSALQRVDL
SETIPPGLEPPIPRFLGEGGGGRSWWTLRDALVFLHHPTPDVALATLEDHSHPAWQRLKAEELLAQQLSQLEAKRERDRL
RAPVLRPAPGGEGGAALHERLLAALPFGLTAAQRRVCAEIAADLARAVPMHRLLQGDVGSGKTVVAALSAAVCMDAGWQC
ALMAPTEILAEQHFRKLIGWLEPLLAASGRRVAWLAGGQKKKERAAMLALVESGEAALVVGTHAVIQEQVRFRNLALAVI
DEQHRFGVAQRLALRRKLADQGMEPHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVTKLIADSRKDEVIERIG
AQVASGRQVYWVCPLIEESEALDLSNATATHLELSEALQGDPAHGQAPVMVGLLHSRMPPAEKKAVMELFTAGTMGVLVS
TTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGSAASACVLLYSTGESGRLGETARDRLRAMAETQDGFEIARR
DLEIRGPGEFLGARQSGAPMLRFADLATDTLLLEWARETAPRMLDGHPGDARRHVGRWLGGKADYLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-92 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_0593 YP_968971.1 ATP-dependent DNA helicase RecG BAC0356 Protein 5e-130 50