Gene Information

Name : Aave_0559 (Aave_0559)
Accession : YP_968938.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 606698 - 607084 bp
Length : 387 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACCCATTTCCATGGCGAAGGCAACATCGGTTCGCCACCGAAGTTCGACGAGTACCCCAACGGCAACGAAGAGCC
GCGGCGCGTGCTGCGGCTCAACGTGTACTTCGACAATCCCGTGCCTGGCAGCGACGGCACCTACGATGACCGCGGCGGGT
TCTGGGCGCCGGTGGACTGGTGGCACCGGGATGCCGAGCACTGGGCCACGCTATTCGCGAAGGGGATGCGGGTCGTCGTG
CGTGGCCGCATGATTCGCGACCAGTGGACGGATGACGAAGGCCAGCCGCGCACGACATACAAGGTGGACGCCCGCAGCGT
TGCGATCCTGCCTTACCGGCTGGATTCGGTAGAACTCAGTCCCAAGACCGCTGCCGGCGACGAGTAG

Protein sequence :
MSTHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVPGSDGTYDDRGGFWAPVDWWHRDAEHWATLFAKGMRVVV
RGRMIRDQWTDDEGQPRTTYKVDARSVAILPYRLDSVELSPKTAAGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 1e-36 68
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 2e-35 67
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 3e-26 59
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 2e-23 55
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 2e-24 55