Gene Information

Name : Aave_4638 (Aave_4638)
Accession : YP_972947.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5161964 - 5162638 bp
Length : 675 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4687 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCATCCTCATTGCCGAAGACGATCAGGTTCTGGCGGATGGGCTGCTGCGCACGCTGCGAGGGTCCGGGGCCGCGGT
GGACCACGTGGCGAGCGGCAGCGATGCCGACACCGTGCTCGCGACGACGCAGGAATTCGACCTGCTGATCCTCGATCTCG
GCCTGCCACGCATGCATGGGCTGGACGTGCTCAAGCGGCTGCGCGGCCGCGGCTCGGCGCTGCCGGTGCTGATCCTCACG
GCGGCCGACAGCGTGGACGAGCGCGTGAAGGGCCTGGATTACGGCGCCGACGACTACATGGCCAAGCCTTTCTCGCTGCA
GGAACTGGAGGCGCGCGTGCGCGCCCTCACGCGCCGCGGCATGGGCGCCACCAGCAGCACCATCCGGCACGGCCCGCTCG
TCTATGACCAGGCCGGACGCATGGCCACCATCGACGGCAAGCTGGTGGAGCTGTCCGCCCGCGAGCTGGGCCTGCTGGAA
GTGCTGCTGCAGCGCGCGGGACGGCTGGTGAGCAAGGAGCAACTGGTGGAGCGGCTCTGCGAATGGGGCGAGGAGGTGAG
CAACAACGCCATCGAGGTGTACATCCATCGCCTGCGCAAGAAGATCGAGCGTGGTCCGATCCGCATCGCCACGGTGCGGG
GGCTGGGCTACTGCCTGGAGAAGGTCGCCGCTTAG

Protein sequence : 
MRILIAEDDQVLADGLLRTLRGSGAAVDHVASGSDADTVLATTQEFDLLILDLGLPRMHGLDVLKRLRGRGSALPVLILT
AADSVDERVKGLDYGADDYMAKPFSLQELEARVRALTRRGMGATSSTIRHGPLVYDQAGRMATIDGKLVELSARELGLLE
VLLQRAGRLVSKEQLVERLCEWGEEVSNNAIEVYIHRLRKKIERGPIRIATVRGLGYCLEKVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_4638 YP_972947.1 two component transcriptional regulator BAC0487 Protein 2e-36 46
Aave_4638 YP_972947.1 two component transcriptional regulator BAC0083 Protein 3e-34 44
Aave_4638 YP_972947.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-32 44
Aave_4638 YP_972947.1 two component transcriptional regulator BAC0197 Protein 3e-31 42
Aave_4638 YP_972947.1 two component transcriptional regulator BAC0638 Protein 8e-27 42
Aave_4638 YP_972947.1 two component transcriptional regulator BAC0347 Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_4638 YP_972947.1 two component transcriptional regulator VFG0473 Protein 4e-38 44
Aave_4638 YP_972947.1 two component transcriptional regulator VFG1390 Protein 6e-33 42