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Name : Aave_0452 (Aave_0452) Accession : YP_968833.1 Strain : Acidovorax citrulli AAC00-1 Genome accession: NC_008752 Putative virulence/resistance : Virulence Product : HrcV family type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 488239 - 490302 bp Length : 2064 bp Strand : - Note : TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bma:BMAA1630 type III secretion inner membrane protein SctV DNA sequence : ATGGCCAAACGATTCGATTCCACCCTGGTCAACGACCTGACGATGGCCGGCTTTCTCGTCGGCGTGATCGCGCTGATGAT CCTGCCGCTGCCCACCCTGCTGATCGACTCGCTGCTCGCGATCAACCTCAGCATCAGCGTGCTGCTGCTGATGACCACCC TGTTCATACCGGACGCGGTCTCGCTCTCCACCTTCCCATCGCTGCTGCTGTTCACCACGCTGTTCCGGCTGTCGCTGAAC ATCGCTTCGACCAAGGCCATCCTGCTGCACGCCGACGCGGGCCACCTGATCGAGAGCTTCGGCCAGCTCGTGGTTGGCGG CAACCTCGTGGTGGGCATCGTGGTGTTCCTGGTGATCACCATCGTGCAGTTCATCGTCATCGCCAAGGGCTCGGAGCGCG TCGCCGAAGTCGGCGCGCGCTTCACGCTCGATGCGCTGCCCGGCAAGCAGATGAGCATCGACGCCGACCTGCGCGCCGGC CTGCTCACCGCCGACGAGGCCAAGGCCAAGCGCGCCCGGCTCAGCATGGAAAGCATGCTGCACGGCGGGATGGACGGCGC GATGAAGTTCGTCAAGGGCGACGCCATCGCGGGCCTCATCATCACGCTGGTCAACATCCTCGCCGGCATCGTGGTGGGCA TCCTTTACCACAGCATGACCGCCGGGGAGGCGGCCAACCGCTTCGCCGTGCTGTCCATCGGCGATGCCATGGTCTCGCAG ATTCCCGCGCTCTTCATCTGTATGGCCGCCGGTATCCTGACCACCCGCGTGGCCGACGAGCACCGCAAGAAGCCCACCTC CCTGGGCGAGGACATGACGGAGCAGCTCACGCGCAATACCCGCTCCATGTACCTCGCGGGGGCCCTCACCCTGGGCTTCG CGGCCATTCCGGGCTTCCCCGCCGTTCCGTTCTGCCTGCTGGCGGCGGGCCTCGTGGGCGGCGGCCAGTGGCTGTCGCGC AGGCGCAAGTCGGCCGCCCCGGGCAGCGCCAAGACCCACTCCAAACCCATCGCCTCCCTGCTGCGCGAAGGCGGCAAGGG CGAGGGCACGGCCATCCAGCACCGCGCGCCCGAGTTCGCCAAGCCGCTGTCCATCCGCCTGTCCGATCCGCTCGCCCGCC TGCTCAATGCCGAGCGGCTCGACCAGGCCCTGAACAAGGAACGCGAGGGACTGCAGACGCGGCTGGGGCTGCCCTTCCCC GGCGCCGCGATGTGGGTCTGGGACGGCCTCGAGGACCTGCGCTTCGACATCCTCATCAACGACGTGCCCGTGGCCCAGCC CCGGTTGCCCGGCGACATGCTCCTGCTGCTGGACCCGCAGTCCCCCCTGGCCGCGCAGGCCCAGCGGCACGGCCCGCTGC TGGGCATGGAGGAGTCGCTCTGGGTGCCCCAGACGGCCGTCCCGCCCGCCCAGCGCGCCGGGGCGTGCCTGGAGATCGAG CAGGTGATCGCCCGCGAGGTGGTGGAGATGCTCCAGCGCCATGCGCACCTCTTCATGGGCGTGCAGGAAGTGCAGTGGAT CATCGAGCGCGCCACGCCGGAATACCCGGGGCTGGTGGCCGAAGTGCAGAAGGTCATGCCGCTGCAGCGCATGGCCGAGG TGCTGCGCCGCCTGCTGGAAGAGCAGGTGCCCATCCGCAACATCCGCAGCATCTTCGAGAGCCTCATCACCTGGGCCCCC AAGGAAAAAGACCTGCTGCTGCTCACCGAATACGTGCGCTCCGACCTGGGCCGCTACCTCGCGCACGAGGCCGGCGGCGG CCAGCGGCACATCTCGGCCATCCTGCTCGCCCCGGAAATCGAGCAGGCGATCCGCGGCTGCATCAAGCCCACGCCCGCGG GCAACTACCTCGCCATGTCGCCGGACGATGCGCGCGACATCACCGACCGCATCGCGGCCGTCGCCCGCTCGTCGCCCGCC ACCGGCGTGGCCCTGGTCACTTCCATGGACATCCGGCGCTATGTCAAGAAAATGATCGAAGGACGCATCGACTGGCTGCG CGTGTACTCCTTCCAGGAGCTGGGCAGCCTGATCGAGCTGCGGCCGATCGGCCGCGTTGCATAG Protein sequence : MAKRFDSTLVNDLTMAGFLVGVIALMILPLPTLLIDSLLAINLSISVLLLMTTLFIPDAVSLSTFPSLLLFTTLFRLSLN IASTKAILLHADAGHLIESFGQLVVGGNLVVGIVVFLVITIVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAG LLTADEAKAKRARLSMESMLHGGMDGAMKFVKGDAIAGLIITLVNILAGIVVGILYHSMTAGEAANRFAVLSIGDAMVSQ IPALFICMAAGILTTRVADEHRKKPTSLGEDMTEQLTRNTRSMYLAGALTLGFAAIPGFPAVPFCLLAAGLVGGGQWLSR RRKSAAPGSAKTHSKPIASLLREGGKGEGTAIQHRAPEFAKPLSIRLSDPLARLLNAERLDQALNKEREGLQTRLGLPFP GAAMWVWDGLEDLRFDILINDVPVAQPRLPGDMLLLLDPQSPLAAQAQRHGPLLGMEESLWVPQTAVPPAQRAGACLEIE QVIAREVVEMLQRHAHLFMGVQEVQWIIERATPEYPGLVAEVQKVMPLQRMAEVLRRLLEEQVPIRNIRSIFESLITWAP KEKDLLLLTEYVRSDLGRYLAHEAGGGQRHISAILLAPEIEQAIRGCIKPTPAGNYLAMSPDDARDITDRIAAVARSSPA TGVALVTSMDIRRYVKKMIEGRIDWLRVYSFQELGSLIELRPIGRVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 6e-147 | 57 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 4e-147 | 57 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 3e-108 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Aave_0452 | YP_968833.1 | HrcV family type III secretion protein | VFG0064 | Protein | 2e-106 | 43 |
| Aave_0452 | YP_968833.1 | HrcV family type III secretion protein | VFG0198 | Protein | 8e-101 | 42 |
| Aave_0452 | YP_968833.1 | HrcV family type III secretion protein | VFG0384 | Protein | 4e-101 | 41 |
| Aave_0452 | YP_968833.1 | HrcV family type III secretion protein | VFG2126 | Protein | 2e-96 | 41 |
