Gene Information

Name : Aave_4392 (Aave_4392)
Accession : YP_972706.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 4881979 - 4883403 bp
Length : 1425 bp
Strand : -
Note : KEGG: rfr:Rfer_0553 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protei

DNA sequence :
ATGGCTGACAGTGCCGCCGTGTCGGATCCGCCACTGCAGGATTCGCCCTGGGATGCGTTCCTGTCCGGCGCGCGCGCGCG
CCTGGCCGAGGGCACGGCGCTGGAAACCCGCGGCACCCTCACCCGGCTGACCGGGCTCGTCCTGGAGGCCGCGGGCATCC
GCGTCCCCGTGGGATCGCAATGCCTGGTGCAGATGCCGGGCCACGAGGCCGTGCTGGCGGAAGTCGTCGGCTTCTCGGGC
GACCGGGCCTTCCTGATGCCCGCGGGCGATATCCACGGCCTGTCCAGCGGCGCGAGCGTGGTACCGGCCGCGCCCTATGT
ACCCGTGCCGCGCCTGTGCGATTCCACCCGGCCGTCAACGGCCGCGGGCATCCTGCGCCTGCCCGTGGGCGACGGCCTGC
TGGGCCGCGTCGTGGACTCGCAGGGCCTGCCGCTCGACCATGGCGGGCCCGTGCAGGACGTTTCATCCGAGCCCATGGAC
CGGCGCCAGATCAACGCCATGGACCGCGATCCCGTGCGCCAGATGCTGGACACCGGCGTGCGGGCGATCAACGCGCTGCT
GACCGTGGGCCGCGGGCAGCGCCTGGGGCTTTTCGCGGGATCCGGCGTCGGCAAGAGCGTACTGCTCGGCATGATGGCCC
GCTATACCCAGGCCGACGTCATCGTCGTGGGCCTCATCGGCGAGCGCGGCCGCGAGGTCAAGGAATTCGTGGAGGACATC
CTGGGCGAGCAGGACCGCGAGCGGGCCGTGGTGGTCGCCGCTCCGGCCGATGCGCCGCCGCTGCTGCGCATGCAGGGCGC
CGCCTATGCGACGGCCATCGCCGAGCATTTCCGGGACAAGGGCAAGCATGTGCTGCTGCTCATGGATTCGCTCACCCGCT
ATGCCATGGCCCAGCGCGAGATCGCGCTCGCCATCGGCGAGCCGCCGGCCACCAAGGGCTATCCGCCGAGTTGCTTCGCC
AAGCTGCCGGCGCTGGTCGAGCGCAGCGGCAACGGCTTGCACGGCGTGGGCTCCATCACCGCCTTCTATACCGTCCTCTC
CGAAGGGGACGACCAGCAGGACCCCATCGCCGACTCGGCCCGCGCCATCCTCGACGGCCACATCGTGCTGTCCCGCGCGC
TGGCGGAAACCGGGCATTTCCCGGCGATCGACATCGAGCAGTCCGCGTCGCGGGTCATGCACAACGTGGCCTCGCGCGAG
CATTTCGACCTCGCGCGGCGGTTCCGCGCGGTGTATTCGCGCTACCAGAAGAGCCGCGACCTGATCCAGGTCGGCGCCTA
CATGAGCGGCTCCGACCCGGCGCTGGACGAGGCCATCCGCCTGCAGCCGGCGATGGCCGCCTTCCTGCAGCAGAACATGT
TCGAGGCCGCGCCCATGCAGGACAGCCTGCACGCCATGGCGGCCGTACTGGGCCCGCAGGCCTGA

Protein sequence :
MADSAAVSDPPLQDSPWDAFLSGARARLAEGTALETRGTLTRLTGLVLEAAGIRVPVGSQCLVQMPGHEAVLAEVVGFSG
DRAFLMPAGDIHGLSSGASVVPAAPYVPVPRLCDSTRPSTAAGILRLPVGDGLLGRVVDSQGLPLDHGGPVQDVSSEPMD
RRQINAMDRDPVRQMLDTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDI
LGEQDRERAVVVAAPADAPPLLRMQGAAYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFA
KLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADSARAILDGHIVLSRALAETGHFPAIDIEQSASRVMHNVASRE
HFDLARRFRAVYSRYQKSRDLIQVGAYMSGSDPALDEAIRLQPAMAAFLQQNMFEAAPMQDSLHAMAAVLGPQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-71 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 9e-72 47
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-65 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-65 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-68 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-68 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-71 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-71 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-71 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-71 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-71 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-74 46
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-56 46
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-56 46
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-56 46
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-56 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-64 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-64 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-64 45
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-64 45
escN AAK26715.1 EscN Virulence LEE Protein 1e-64 45
escN AAL57542.1 EscN Virulence LEE Protein 1e-64 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-62 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-69 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-60 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-60 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 8e-57 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-62 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-64 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-64 44
escN AAC38383.1 EscN Virulence LEE Protein 2e-64 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-64 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-64 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-64 44
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-63 44
escN AAC31513.1 L0034 Virulence LEE Protein 1e-64 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-64 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-61 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-63 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-61 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-61 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-60 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-60 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-56 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG2499 Protein 8e-117 62
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-113 61
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG1254 Protein 1e-105 59
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-75 46
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-71 46
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG0555 Protein 8e-57 46
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-75 44
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-70 44
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-64 44
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG0812 Protein 6e-65 44
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-60 42
Aave_4392 YP_972706.1 flagellar protein export ATPase FliI VFG1008 Protein 8e-55 41