Gene Information

Name : Aave_3964 (Aave_3964)
Accession : YP_972281.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4393989 - 4394648 bp
Length : 660 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_3820 two component transcriptional regulator, winged helix family

DNA sequence :
ATGCGCCTTCTGCTGGTGGAAGACGACACGATGATCGGCGAAGCCGTGTATGACCTGCTGCGCGCGGAGCAGCACGCGGT
GGACTGGGTGCGCGACGGCGAGATGGCCGATACGGCGCTGCGCACGCAGACCTACGACGTGGTGCTGCTGGACCTGGGCC
TGCCGCGCCGCGACGGCCTGCAGGTGCTGCGCGATCTGCGCGCGCGCAAGGACCGCACGCCGGTGCTGGTGGCCACGGCG
CGCGACGCGGTGGCCCAGCGCGTGCAGGGCCTGGACGCGGGCGCCGACGACTACGTGCTCAAGCCCTATGAACTGGACGA
ACTGCTGGCGCGCATCCGGGCACTGGCGCGGCGCGCGGCAGGGCGGGCCGAGCCGGTCTATGAGCACAAGGGCGTGAGCA
TCGATCCGGCCACGCGCGAGGTCACCGTGAACGGCGAGCCGGTGGTGTTGTCCGGGCGCGAATGGGCGGTGCTGGAGCCG
CTCATCGCCCGCCCGGGGCGCGTGCTCTCGCGCGCGCAGCTCGAGGAAAAGCTCTACAGCTGGAAGGACGAGATCAGCAG
CAATGCGGTCGAGGTCTATATCCACGGGCTGCGCAAGAAGCTCGGCGCGGACCTGGTGCTGAACGTGCGCGGCGTGGGCT
ACATGGTGCCGAAGGTATGA

Protein sequence :
MRLLLVEDDTMIGEAVYDLLRAEQHAVDWVRDGEMADTALRTQTYDVVLLDLGLPRRDGLQVLRDLRARKDRTPVLVATA
RDAVAQRVQGLDAGADDYVLKPYELDELLARIRALARRAAGRAEPVYEHKGVSIDPATREVTVNGEPVVLSGREWAVLEP
LIARPGRVLSRAQLEEKLYSWKDEISSNAVEVYIHGLRKKLGADLVLNVRGVGYMVPKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-22 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_3964 YP_972281.1 two component transcriptional regulator VFG1390 Protein 1e-18 43