Gene Information

Name : Aave_0320 (Aave_0320)
Accession : YP_968701.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 352436 - 353185 bp
Length : 750 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: pol:Bpro_0239 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGGACAAAAAAGTGGTTTTGGTGACGGGAGGCAGCCGGGGCATCGGCGCCGCCACCGCCCGGCTGGCCGCCCGGCACGG
CTGGGCCGTGGCGGTGAACTATGCGCGCGATGCCGCTGCGGCGGGGCGCGTGGTCGATGCCATCCGGGAGGAAGGCGGCG
ACGCCGTGGCCATCCAGGCGGACGTGGCGGACGAGTCGCAGGTCGTGGCGCTGTTCGAGGCGGTGGACGCGCAGTGGGGC
CGGCTGTCGGGCCTGGTGAACAATGCCGGCGTGGTGGACGTGCCGGCACGCGTGTCCGAGATGAGCGGCCAGCGGCTGCG
GCGCATGTTCGACATCAACGTGCTGGGCAGCTTCTACTGCGCCCGCGAGGCAGTTCGGCGCATGGGCCTGCAGCGCGGCG
GCCAGGGCGGCAGCATCGTCAACGTTTCCAGCGCCGCAGCCCGCCTGGGTGCCGCCCACCAGTACGTGGACTACGCGGCA
GCCAAGGGCGCCATCGACGTGCTCACGGTGGGCCTCGCGCGCGAAGTGGCCGCGGAAGGCATCCGCGTGAACGCGGTGCG
GCCCGGCCTGATCGATACCGAGATCCACGCGAGCGGAGGGTTGCCCGACCGTGTGCGCGACCTTGCCCACCAGGTGCCCA
TGGGCCGGGGCGGCACGCCGGAAGAAGTGGCCGAATCCATCGTCTGGCTGCTGTCGGACGCCGCGAGCTACACCACCATG
AGCCTGCTGGACGTTTCCGGCGGCCGCTGA

Protein sequence :
MDKKVVLVTGGSRGIGAATARLAARHGWAVAVNYARDAAAAGRVVDAIREEGGDAVAIQADVADESQVVALFEAVDAQWG
RLSGLVNNAGVVDVPARVSEMSGQRLRRMFDINVLGSFYCAREAVRRMGLQRGGQGGSIVNVSSAAARLGAAHQYVDYAA
AKGAIDVLTVGLAREVAAEGIRVNAVRPGLIDTEIHASGGLPDRVRDLAHQVPMGRGGTPEEVAESIVWLLSDAASYTTM
SLLDVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 3e-53 56
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-48 54