Gene Information

Name : Aave_3019 (Aave_3019)
Accession : YP_971360.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3328187 - 3328900 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2425 ABC transporter-related protein

DNA sequence : 
ATGTCGGAAACACCGCCGGACACCCCGGCCACCACCATCGCCGCCCCGGTCATCGCCGTGGAGCACGTCCACAAGTCGGT
GACGGATTCGACCGGCACGCTCGACATTCTGCGGGATATCGATTTCCGGATCGCTCCCAGGGACACCGTGGCCATCGTGG
GCGCCTCGGGCTCGGGCAAGAGCACGCTGCTGTCGATCATCGCGGGGCTCGACACACCCACGCGCGGCACCGTGCGGCTG
GCCGGCGAAGACCTGTTCGCGCTGGGCGAGGATGACCGCGCCGCGCTGCGCGCGCGGCGCATGGGGTTCGTGTTCCAGAG
CTTCCAGCTGCTGGGCAACCTGACCGCGCTGGAGAACGTGATGCTGCCGCTGGAGCTGGCCCAGCGCCGCGACGCCCGGC
CGCTGGCCACCGAGATGCTGGGCCGCGTCGGCCTGGGCCAGCGCCTGGGCCACTACCCGAAGGTACTGTCGGGCGGCGAG
CAGCAGCGCGTGGCGCTGGCACGGGCCTTCGTGGTGCAGCCGGACGTGCTGCTGGCCGACGAGCCCACGGGCAGCCTGGA
CTTCGCGACGGGCGAGACGATCATGCGCCTGATGTTCGACCTGAACCGCGAGCAGGGGACCACGCTGCTGCTCGTCACGC
ACGACCGCGGCATCGCGGCCCAGTGCGACCGGCGCATCACCATCGACGCAGGCCGGATGGTGGCCGGCGCCTGA

Protein sequence : 
MSETPPDTPATTIAAPVIAVEHVHKSVTDSTGTLDILRDIDFRIAPRDTVAIVGASGSGKSTLLSIIAGLDTPTRGTVRL
AGEDLFALGEDDRAALRARRMGFVFQSFQLLGNLTALENVMLPLELAQRRDARPLATEMLGRVGLGQRLGHYPKVLSGGE
QQRVALARAFVVQPDVLLADEPTGSLDFATGETIMRLMFDLNREQGTTLLLVTHDRGIAAQCDRRITIDAGRMVAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-24 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_3019 YP_971360.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-38 48
Aave_3019 YP_971360.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-30 47
Aave_3019 YP_971360.1 ABC transporter-like protein NC_012469.1.7685735. Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_3019 YP_971360.1 ABC transporter-like protein VFG2059 Protein 1e-13 43