Gene Information

Name : Aave_3002 (Aave_3002)
Accession : YP_971343.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3310459 - 3311151 bp
Length : 693 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS03101 probable two-component response regulator transcription regulator protein

DNA sequence : 
ATGAGCACCGCGCAGATCCTGGTCGTGGAGGACGATCCCCGCGTTGCCGATTTCCTGCAGCGTGGCCTGCGCGCGGAAGG
CTACGGCGTGCAGATGGCGCGCACCGGTCCCGAAGGGCTCGCGCTCGCCCGCGCCGGGGAGGCGGCGCTGGTGATCCTCG
ACGTGATGCTGCCCGGCATGACCGGGCTGGACCTGTGCCAGTCGCTGCGGGCCGAAGGCGGCCAGGTGCCGGTGCTGATG
CTCACGGCCCTGAGCAGCATCGAGGACAAGGTCGCCGGATTGAAGCTCGGCGCGGACGACTACCTCACCAAGCCGTTCGC
CTTCGAGGAACTGCTGGCGCGCATCGAGGCGCTGCTGCGGCGCGGGCGCGAGCAGCGCCCCCGGGCGACCACGCTGCAGG
TGGCGGACCTGGTACTCGACCTGGAACGCATGCAGGCCAGCCGCGCGGGGCGCCCGATCGCGCTCACCGCCAAGGAGCTG
GCCTTCCTGGAGCTGCTCATGAGCGCCCCGGGCCGGCTCTGCAGCCGCGAGCGCATCCTCTCCAACGTGTGGGGCATGCA
CGAGGACCCACTGACCAATGTGGTGGATGTCTATGTGCGCCGCCTGCGCAGCAAGATCGATGAAGGGCACCCGCTCGCGC
TGCTCAAGACCGTGCGCGGGTTGGGCTACCGCCTGGACGACGGCGAGACGTAG

Protein sequence : 
MSTAQILVVEDDPRVADFLQRGLRAEGYGVQMARTGPEGLALARAGEAALVILDVMLPGMTGLDLCQSLRAEGGQVPVLM
LTALSSIEDKVAGLKLGADDYLTKPFAFEELLARIEALLRRGREQRPRATTLQVADLVLDLERMQASRAGRPIALTAKEL
AFLELLMSAPGRLCSRERILSNVWGMHEDPLTNVVDVYVRRLRSKIDEGHPLALLKTVRGLGYRLDDGET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-30 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-30 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0638 Protein 1e-31 49
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0347 Protein 9e-32 48
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0083 Protein 2e-38 48
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0308 Protein 2e-33 48
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0125 Protein 5e-35 48
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0197 Protein 2e-32 48
Aave_3002 YP_971343.1 two component transcriptional regulator BAC0111 Protein 5e-35 46
Aave_3002 YP_971343.1 two component transcriptional regulator HE999704.1.gene1528. Protein 1e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_3002 YP_971343.1 two component transcriptional regulator VFG0596 Protein 5e-31 45
Aave_3002 YP_971343.1 two component transcriptional regulator VFG1390 Protein 2e-33 44