|
Name : rplS (Aave_1887) Accession : YP_970245.1 Strain : Acidovorax citrulli AAC00-1 Genome accession: NC_008752 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 2043106 - 2043492 bp Length : 387 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAATCTGATCCAGACCCTCGAGCAGGAAGAAATCGCCCGCTTGAACAAGACCATCCCCGAATTCGCGCCCGGCGACAC CGTCATCGTGAGCGTGAACGTGGTGGAAGGCAACCGCAAGCGCGTGCAGGCCTACGAAGGCGTGGTGATCGCCAAGCGCA ACCGTGGCCTCAACAGCGGCTTCACCGTGCGCAAGATCTCCAGCGGCGAAGGCGTGGAGCGTACGTTCCAGACCTACAGC CCGCTGATCGCCAGCATCGAAGTGAAGCGCCGCGGCGACGTCCGCCGCGCCAAGCTGTACTACCTGCGCGACCGTTCCGG CAAGTCCGCGCGCATCAAGGAAAAGCTGCCTTCGCGCGTCAACAAGGCTGCCGCCACCGCCGCTTGA Protein sequence : MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYS PLIASIEVKRRGDVRRAKLYYLRDRSGKSARIKEKLPSRVNKAAATAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-34 | 67 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 7e-26 | 58 |
