Gene Information

Name : Aave_1313 (Aave_1313)
Accession : YP_969678.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1440178 - 1441107 bp
Length : 930 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD

DNA sequence : 
GTGTTAACTTCGCGCCCCATGACCCTTTCGCCCGGCAGTCAGGCTGCCATCGACGCGTTCGTTGACACCCTCTGGCTCGA
AGACGGCCTCTCGCGCAATACGCTGGCGGCCTACCGCCGCGACCTCGCGCTCTATGCGCAATGGCTCGGGGAGCATGTGC
CCGATACCGCGGGCATGCTCGACGCCACAATGGAACACCACCTGCAGGCCTATTTCGCGGCGCGCCACGCCCAGACGCGC
GCCACGTCGGCCAACCGCCGGCTTACGGTGCTGCGGCGGTATTTCCAGTGGGCCCTGCGGGAGCGCCGCATCGCCATCGA
TCCTACCGTGCGCCTGCAGGCGGCGCGGCAGCCGCTGCGCGTGCCCAAGACCCTCTCGGCCGCGCAGGTGGAAGCGCTCC
TCCAGTCCCCCGACACGTCCACGGCCCTGGGCCTGCGCGACCGCGCGATGCTGGAGCTCATGTACGCCAGCGGCCTGCGC
GTGACCGAACTCGTCACCTTGAAGACCTACCACGCCGGCCTGGCCGAGGGCGTGCTGCGGGTGATGGGCAAGGGCAGCAA
GGAGCGCCTCGTGCCCTTCGGGGAAGTCGCTGCGCAATGGCTGCAGCGGTACCTGGACCATGCCCGGGCGGACATTCTGG
CAGGACAGCGGACCGACGACCTGTTCGTGACCCGGCGCGGCGCCGGCATGACGCGTGCCATGTTCTGGGTGGTCGTGAAA
AAGCATGCGCAATCGGCCGGGATCCACGTGCCCCTGTCGCCGCACACGCTGCGCCATGCCTTCGCCACGCACCTGCTCAA
CCACGGAGCGGACCTGCGGGTCGTGCAACTGCTGCTGGGCCATGCGGACATCTCCACCACGACGATCTACACCCATGTGG
CGCGGGAGCGGCTCAAGGCGCTGCATGCCCAGCACCACCCGAGGGGCTGA

Protein sequence : 
MLTSRPMTLSPGSQAAIDAFVDTLWLEDGLSRNTLAAYRRDLALYAQWLGEHVPDTAGMLDATMEHHLQAYFAARHAQTR
ATSANRRLTVLRRYFQWALRERRIAIDPTVRLQAARQPLRVPKTLSAAQVEALLQSPDTSTALGLRDRAMLELMYASGLR
VTELVTLKTYHAGLAEGVLRVMGKGSKERLVPFGEVAAQWLQRYLDHARADILAGQRTDDLFVTRRGAGMTRAMFWVVVK
KHAQSAGIHVPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIYTHVARERLKALHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-57 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-57 54