Gene Information

Name : Dvul_0054 (Dvul_0054)
Accession : YP_965505.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 67927 - 69963 bp
Length : 2037 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dvu:DVU3338 K+-transporting ATPase, B subunit

DNA sequence :
ATGCACACCGCAAACAACACTTCGACACCTTCTGCCCTCTACCGGCGCGCATGCATCGACGCCATCGGCAAGCTACGCCC
GAATCATATGGTACGTAATCCGGTCATGTTCACCGTTGCCGTCGGCGCCCTGCTGACCACTGTCGCCTTCGTCCGCGACA
TGATGGCCGGTTCCGGCGTCCTGTTCAGCGCGCAGATTACGTTATGGCTATGGGCTACCGTCCTGTTCGCCAACTTCGCC
GAGGCACTGGCAGAAGGGCGAGGCAAGGCACAGGCAGACAGCCTGCGCCATGCCCGCCGTGACACCCCGGCGCATCAGGT
GCAACCCGACGGCACGGTGCAGGTGGTATCTGCCTCGACCCTGCAACGCGGCGATGAGGTCGTCGTCGCAGCGGGCATGG
TCATTCCCGCCGACGGCACCGTAATCGCCGGGGCTGCCGCCGTGGACGAGTCGGCCGTCACCGGAGAGTCGGCACCTGTC
ATCCGTGAATCGGGTGGTGACAGGAGTGCCGTCACCGGCGGTACGACGGTCATCTCCGACACCCTGCGTATCAAGGTCAC
ACAGGAACCGGGAAAGTCGTTCCTTGACCGGATGATAGCCCTTGTCGAAGGGGCCGAGCGCAAGAAGACGCCCAACGAGA
TAGCCCTGAACATCCTTCTTGCGGGTCTCACGCTCATCTTCATCCTCGCCACGGTGACCCTCAAGCCCATGGCCCTGTTC
CACGGTGCGCGGGTGGACGTGGTGGTTCTCGCCGCCTTGCTGGTGTGTCTCATCCCCACCACCATCGGAGGGCTGCTGGC
GGCGATTGGCATCGCCGGCATGGACAGGCTGCTGCGTCGCAACGTGCTGGCGATGTCCGGTCGTGCCGTCGAGGCCGCAG
GAGACGTGGACGTGCTGTTGCTGGACAAGACGGGGACGATAACCCTCGGCAACCGCATGGCCACCGCATTCATCCCCATG
CCGGGCATCTCTCCCGAACACCTGTGCAAGGCCGCCCTGCTTGCATCCCACGGTGACGAGACTCCTGAAGGTCGTTCCAT
CGTCACCCTTGCCCGGACTGAACTCGGCACGGGTCTCCCCGCGATGCCCGACAACGCCACGTTCATCCCCTTCCGGGCGG
AGACCCGCATGAGCGGCAGCGACTACACCGGAACGTCCATCCGCAAGGGCGCAGCCGATGCCGTGAAAGCGTGGTTGCGG
GGACTGGGGAGGCACATGGACGAGACGACACTCGACACCGTGGTGCTGGATATCGCGGCACAAGGCGGGACGCCGCTCGT
CGTCGCATCCGACACCGAGGGGGTGCTGGGGGTCATCCACCTGAAGGACATGGTCAAGCCGGGCATAAGCGACAGGTTCG
AACGCATCCGCGCCATGGGCATCCGCACCGTCATGGTCACCGGCGACAACAGGCTCACCGCCCGTTCCATCGCGGCTGAA
GCCGGTGTGGACGACTTTCTCGCGGAGGCCAAGCCGGAGGACAAGCTCGACCTCATCGTGCGCCTGCAAAAGGAAGGAAG
ACTGGTCGCCATGTCGGGTGACGGAACGAACGACGCCCCGGCACTGGCACAGTCGGACGTGGGGCTGGTCATGAACACCG
GCACGCAGGCTGCGCGTGAGGCCGGGAACATGATCGACCTCGATTCCGACCCCACCAAGCTCATCGAGATCGTCGAAATC
GGCAAGCAGCTGCTCATCACGCGGGGGGCGCTCACGACCTTCAGCGTCGCCAACGACATCGCGAAGTACTTCGCCATCAT
CCCGGCCATCTTCGTGGCTTCGCTGCCACAGCTTGCGGCCCTGAATGTCATGGGACTCTCCAGCCCCCGGAGTGCCGTCC
TCTCTGCGGTCATCTTCAATGCGCTGATCATCGTCGCGCTCATCCCCCTCGCCTTGCGTGGCGCGCACTACCGCCCGCGT
TCCACGGGTGCCACCCTGCGGCGCAACCTGCTCGTGTACGGGCTGGGCGGGCTTGTCGCCCCGTTCGTGGGCATCAAGGC
CATCGACATCCTTCTTACCGCCCTCGGCCTCGCATAG

Protein sequence :
MHTANNTSTPSALYRRACIDAIGKLRPNHMVRNPVMFTVAVGALLTTVAFVRDMMAGSGVLFSAQITLWLWATVLFANFA
EALAEGRGKAQADSLRHARRDTPAHQVQPDGTVQVVSASTLQRGDEVVVAAGMVIPADGTVIAGAAAVDESAVTGESAPV
IRESGGDRSAVTGGTTVISDTLRIKVTQEPGKSFLDRMIALVEGAERKKTPNEIALNILLAGLTLIFILATVTLKPMALF
HGARVDVVVLAALLVCLIPTTIGGLLAAIGIAGMDRLLRRNVLAMSGRAVEAAGDVDVLLLDKTGTITLGNRMATAFIPM
PGISPEHLCKAALLASHGDETPEGRSIVTLARTELGTGLPAMPDNATFIPFRAETRMSGSDYTGTSIRKGAADAVKAWLR
GLGRHMDETTLDTVVLDIAAQGGTPLVVASDTEGVLGVIHLKDMVKPGISDRFERIRAMGIRTVMVTGDNRLTARSIAAE
AGVDDFLAEAKPEDKLDLIVRLQKEGRLVAMSGDGTNDAPALAQSDVGLVMNTGTQAAREAGNMIDLDSDPTKLIEIVEI
GKQLLITRGALTTFSVANDIAKYFAIIPAIFVASLPQLAALNVMGLSSPRSAVLSAVIFNALIIVALIPLALRGAHYRPR
STGATLRRNLLVYGLGGLVAPFVGIKAIDILLTALGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-158 59
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 9e-159 59
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 57
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 57
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 57
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-146 57
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 7e-146 57