|
Name : Dvul_2808 (Dvul_2808) Accession : YP_968246.1 Strain : Desulfovibrio vulgaris DP4 Genome accession: NC_008751 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3267957 - 3268952 bp Length : 996 bp Strand : + Note : KEGG: dvu:DVU0160 carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) DNA sequence : ATGACAGACGACCAGATACATCAGACCGACTGGCTGCAACGCGGCCGCGACGTTCTCGATATCGAAGCGGAGGGCATCCG TGCCGTACGCGACAGGCTTGGCCCCTCGTTCGAAGCCGCGCTGGCCCTGCTGGCAGGATGCCGCGGCCGTGTCGTGGTGA CAGGCCTCGGCAAGTCGGGGCTGGTGGGCCGCAAGCTGGCCGCCACCTTCTCGTCCACGGGCAGCCCCGCCTTCTTCCTG CACCCCGTAGAGGGCGCACATGGCGACATGGGCAGTCTCAAGGCCGACGACGTGGTCATCGCCATCTCCAACTCCGGCGA GACGGATGAACTCAACGCCATCCTGCCCAGCCTGCGCGCCATCGGCACGCCCATCATCGCCCTGACGGGTCGCGCCGACT CGTCACTGGGACGCGGTGCCGACATCGTTCTCGACTGCGGCGTACCGCGTGAAGCGTGCCCGCTGGGGCTTGCCCCTACG GCGTCCACCACGGCGGTACTCGCCCTTGGCGACGCGCTGGCGGTCTGCCTCATCGACTGGAAGTCCTTCACCGAGAACGA CTTCCTGCGCTACCACCCCGGCGGTTCACTGGGCCAGCGGCTGCGGCTGCGCGTGGCTGAACTCATGCACACCGAGGGCA TTCCGGTGGTCAACGAAGAGGCCGTGTGCGAAGAGGCCGTTCTCGCCCTCGACAAGGGCGGCTTCGGGGCCGTGGCCCTC ACGGACGGCGGCGGCAGACTGACCGGCATCCTCACCGACGGTGACGTACGCCGTGCCGTCCTTCGCGGCACCTACGGCCC GCGCGTGGGGGTGACGCACATCATGACGCGCAACCCCCGTTTCGCACGGCAGACCCAGTCGGTGGCCGAACTCATCGACA TCATGGAACAGAAGGCCATCACCGTGCTTCCCATCACCGACGACGACCACCGGCTTGTGGGCCTCGTGCACCTGCACGAC CTGCTGGGCAAGGGCGGCGTCACGTTCGCGGGCTAG Protein sequence : MTDDQIHQTDWLQRGRDVLDIEAEGIRAVRDRLGPSFEAALALLAGCRGRVVVTGLGKSGLVGRKLAATFSSTGSPAFFL HPVEGAHGDMGSLKADDVVIAISNSGETDELNAILPSLRAIGTPIIALTGRADSSLGRGADIVLDCGVPREACPLGLAPT ASTTAVLALGDALAVCLIDWKSFTENDFLRYHPGGSLGQRLRLRVAELMHTEGIPVVNEEAVCEEAVLALDKGGFGAVAL TDGGGRLTGILTDGDVRRAVLRGTYGPRVGVTHIMTRNPRFARQTQSVAELIDIMEQKAITVLPITDDDHRLVGLVHLHD LLGKGGVTFAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-47 | 41 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-48 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-47 | 41 |
