Gene Information

Name : Dvul_2671 (Dvul_2671)
Accession : YP_968110.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 3112361 - 3113674 bp
Length : 1314 bp
Strand : +
Note : KEGG: dvu:DVU0310 flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/subunit beta, central region; H+-transporting two-sector ATPase, alpha/subunit

DNA sequence :
ATGAGCGGCGGCCCGCGAGCCTGTCTCGACCTTCTGCGCGAATGCGCCCCCATGCAGACCTTCGGCAAGATAACCAAGGT
CGTGGGCCTCGTGGCCGAAGGTTCCGGCATCAAGGCACCACTGGGTGCCGTGTGCCACATGCTGCCCGATGACGGCGGTG
AAAGCGTCGCCGCCGAAGTGGTGGGCTTCCGTGACGGACGGTTGCTCTTCATGCCCTACGGTGAACTGCGCGGGGTGCGC
CCCGGCAGCCTCATCCGCAACTCCAGCCTTCCCCCGGTCTTTCCCGTGGGCGAAGGACTGCTGGGCCGGGCTTTCGACGC
CTTCGGCGCCCCCCTCGATGGCGGCACGCCCGTCATGCCGGAGGCATGGGCCCCCCTCTACGCCTCGCCACCCAACCCCC
TCACCCGGCCGCGCATCGACACGCCGCTGGACGTGGGCGTGCGCTGCATCAACAGCCTGCTGACCCTCGGTCGAGGGCAG
CGCGTGGGCATAATGGCGGGTTCCGGCGTCGGCAAGTCGACGCTCATGGGCATGATGGCCCGCTACACCGAGGCGCAGGT
CAACGTCATCGGTCTCATCGGCGAACGCGGGCGAGAAGTGGTCGAGTTCATGGAGAAGGACCTCGGCCCGGAGGGCATGG
CCCGTTCGGTGCTCGTGGTGGCGACCTCGGACCAGTCTCCGCTGGTGCGGATGCGCGCGGCCTACGCAGCCACCGCCGTG
GCGGAGTTCTTTCGCGACCAGGGCAAGGACGTGCTGCTGATGATGGACTCGGTGACGCGCTTCGCCATGGCTGCCCGCGA
AGTGGGCCTCGCCGTGGGTGAACCGCCCACCACCAAGGGTTACACGCCCACCGTCTTCGCCCAGTTGCCACGCCTTCTCG
AACGTGCGGGCCGCAGCCCCGAGGGGACCATCACCGGCATCTACACCGTCCTGGTGGATGGCGACGACTTCAACGAACCC
ATCGCCGACGCCGTGCGCTCCATCCTCGACGGTCACATCGTGCTCACGCGTGAACTTGCCGACCAGGGGCACTTTCCGGC
CATCGACGTGCTCAAGTCCATCAGCCGACTTCGCACCGACATCTGCCCCGACGACATCGTCAACGCGGGCCGGATACTCA
CCCGCCACATGGCGACCTTCCGCCGGGTCGAGGACATGATCAACATCGGGGCCTACGCCACGGGTTCCAACCCCGACATC
GACAAGGCCATCGCCATGGTGGGGCCCATCAACGACTTCCTGCGCCAGCACATCACCGACCAGCAGCCCCTGCCCGGCTG
CTACGAACAGCTTCTGGCCCTCGCAGCCAGCTGA

Protein sequence :
MSGGPRACLDLLRECAPMQTFGKITKVVGLVAEGSGIKAPLGAVCHMLPDDGGESVAAEVVGFRDGRLLFMPYGELRGVR
PGSLIRNSSLPPVFPVGEGLLGRAFDAFGAPLDGGTPVMPEAWAPLYASPPNPLTRPRIDTPLDVGVRCINSLLTLGRGQ
RVGIMAGSGVGKSTLMGMMARYTEAQVNVIGLIGERGREVVEFMEKDLGPEGMARSVLVVATSDQSPLVRMRAAYAATAV
AEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPTVFAQLPRLLERAGRSPEGTITGIYTVLVDGDDFNEP
IADAVRSILDGHIVLTRELADQGHFPAIDVLKSISRLRTDICPDDIVNAGRILTRHMATFRRVEDMINIGAYATGSNPDI
DKAIAMVGPINDFLRQHITDQQPLPGCYEQLLALAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-88 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-89 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-89 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-89 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-89 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-89 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-89 49
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-91 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-87 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-87 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-74 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-74 48
escN AAC38383.1 EscN Virulence LEE Protein 5e-77 48
escN AAC31513.1 L0034 Virulence LEE Protein 8e-77 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 8e-77 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-76 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-76 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-73 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-74 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 4e-74 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-74 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-73 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-77 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-77 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-77 47
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-77 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-76 47
escN AAK26715.1 EscN Virulence LEE Protein 7e-77 47
escN AAL57542.1 EscN Virulence LEE Protein 7e-77 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-76 47
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-79 46
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-79 46
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-75 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-76 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-69 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-79 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-67 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-70 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-70 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-81 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-70 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 7e-67 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 7e-67 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 8e-63 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-58 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-58 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-58 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG2144 Protein 5e-93 53
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG2499 Protein 7e-91 52
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG2331 Protein 3e-92 50
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-86 49
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0390 Protein 7e-88 49
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-92 48
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG1254 Protein 7e-94 48
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0730 Protein 3e-77 48
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0812 Protein 4e-77 48
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0515 Protein 6e-74 48
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG1778 Protein 1e-61 43
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG1008 Protein 4e-62 42
Dvul_2671 YP_968110.1 flagellar protein export ATPase FliI VFG0555 Protein 3e-58 41