Gene Information

Name : Dvul_2662 (Dvul_2662)
Accession : YP_968101.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 3105076 - 3106101 bp
Length : 1026 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG: dvu:DVU0319 NAD-dependent epimerase/dehydratase family protein

DNA sequence : 
ATGAGCACGTTCGACTCCGTCCTGCAGGACATCAACGCCAGCCCGCGCACATGGCTTGTCACGGGCGTAGCCGGGTTCAT
CGGCTCCAACCTGCTGGAGACCCTGCTCAGGCAGGGACAGCGCGTGGTGGGCCTCGACAATTTCCTCACCGGCTACCAGC
GCAACCTCGACATGGTGCGCGACCTCGTGGGCGAAGAGCGTTGGGCGTCGTTCCGCTTCATCGAGGGCGACATCCGCGAC
CTCGCCACCTGCCACGAAGCCTGCAAGGGCGTCGACCATGTGCTGCATCAGGCGGCCCTCGGGTCGGTACCGCGCTCCAT
CGACGACCCCATCCTCTCCAACGAGTGCAACATCACCGGTTTCGTCAACATGCTGGTGGCCGCCCGTGATGCCGGGGCCA
AGAGCTTCGTCTACGCGGCGTCCAGTTCCACCTACGGTGACGAACCCACGCTGCCCAAGGTCGAGGACATCATCGGCAAG
CCGCTTTCGCCCTACGCCGTCACCAAGTACGTCAACGAACTCTACGCCGACGTGTTCGCGCGCTGCTACGGCTTCACCGC
CATCGGGCTGCGCTACTTCAACGTCTTCGGACAGCGCCAAGACCCCTTCGGTGCCTACGCAGCCGTCATCCCCCAGTGGT
TCGCCAGCCTGCTGCGCGGCGAGACCGTGTTCGTGAACGGCGACGGCGAGACCAGCCGCGACTTCTGCTACATCGACAAC
GTGGTGCAGGCCAACATCCTCGCTTCGCTGGCCCCTGCCGAAGCACGCGACAAGGTGTACAACGTGGCCTTCGGCCAGCG
CACCACACTGAACGAACTCTTCGACCTCATCCGCGAAGAGGTGGTGCGTCACAAGCCCGAAGCCGCCGGGGCCACCTGCG
TGCATCGCGACTTCCGCGCGGGAGACGTGCGTCACTCGCTGGCCGACATCACCCGCGCACAGACGCTTCTGGGCTACGCC
CCGGTGTACGACGTGCGCGAGGGGCTGCGACTGGCTGGCGACTGGTACGCCGCCAACCTGAAGTAG

Protein sequence : 
MSTFDSVLQDINASPRTWLVTGVAGFIGSNLLETLLRQGQRVVGLDNFLTGYQRNLDMVRDLVGEERWASFRFIEGDIRD
LATCHEACKGVDHVLHQAALGSVPRSIDDPILSNECNITGFVNMLVAARDAGAKSFVYAASSSTYGDEPTLPKVEDIIGK
PLSPYAVTKYVNELYADVFARCYGFTAIGLRYFNVFGQRQDPFGAYAAVIPQWFASLLRGETVFVNGDGETSRDFCYIDN
VVQANILASLAPAEARDKVYNVAFGQRTTLNELFDLIREEVVRHKPEAAGATCVHRDFRAGDVRHSLADITRAQTLLGYA
PVYDVREGLRLAGDWYAANLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-102 61
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-102 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dvul_2662 YP_968101.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 5e-103 61