Gene Information

Name : Dvul_0210 (Dvul_0210)
Accession : YP_965661.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 258752 - 260074 bp
Length : 1323 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: dvu:DVU3176 UDP-glucose/GDP-mannose dehydrogenase family protein

DNA sequence :
ATGAACGAACAGACATCTTTCGACGACATCGCATCCGGTCGCACCGCTGTGGCGGTGGTGGGCCTCGGCTATGTGGGGCT
GCCCCTCGCCGTTGCCCTCGCGCGCCACTTCCGCGTCATCGGCTTCGACATCCAGCAGAACCGGGTGGATGAACTCTCTT
CCGGGCACGACCGCACGGGCGAGGTCGACGACGCCAGCCTCGCCGCCACACCCGCCCTCTTCACCACGGACGCCGCCCGC
CTCGGCGAGGCAGGGGTCATCATCGTGGCAGTGCCCACCCCCATCGACAACCACCGCAACCCCGACCTCGGCCCGGTGGA
GAAGTCCTCCATCACCGTGGGCCGCCACATGAAGGCCGGTTGTGTTGTCGTGTACGAATCGACGGTCTATCCCGGTGTCA
CCGAAGAGGTCTGTGTCCCCATCCTCGAACGCGAATCGGGCCTCGTCTTCGGACGTGACTTCACCGTGGGCTACTCGCCG
GAACGCATCAACCCCGGCGACAAGGTGCACACGCTGGAGACCATCATGAAGATCGTCTCCGGCAGCGACGCCGCAACCGC
AGACCTGCTGGAAAAGGTCTACGGCAGCGTGGTCACGGCGGGCATCCACAAGGCGGCATCCATCAAGGTGGCTGAAGCGG
CCAAGGTCATCGAGAACACCCAGCGCGACCTCAACATCGCGCTCATGAACGAACTCTCGATCATCTTCGACCGCCTCGGC
ATCGACACCCTCGAGGTGCTCGAAGCCGCAGGCACCAAATGGAACTTCCTGCCCTTCCGGCCCGGTCTGGTGGGCGGTCA
CTGCATCGGCGTCGACCCGTACTACCTGACCTTCAAGGCTGAAGAACTGGGCTACCACCCGCAGGTCATCCTCGCCGGAC
GTCGCATCAACGACGGCATGGGCAAGCATGTGGCCGAAATGACCGTGAAGCGCATGATACGCTCCGGTTGCCGGGTGGCG
GGGGCCCGCGTGGGCGTGCTGGGCCTCACCTTCAAGGAGAACGTGCCCGACCTGCGCAACACCCGCGTCATCGATGTGGT
TCGCGAACTCGAAGAGTACGGCGTGACCGTACTGGTGCACGACCCCTTCGCCGACCCGGCGGAGGCCATGCACGAATACG
GGCTCACCCTCGCGCACCTCAAGGATTTCCAGCAACTCGACGCGCTGGTCGTCACCGTGCCCCACGATGTCTACCGCGCC
ATGGACCTTGTGCAGGTCCGTCGCTGGTGCGCGTCCTCCGGGACGCCGCCCCTGCTTGACGTACGCGGCACGTTCAACCC
CGGCACGGCCCGCGAGGCGGGCTTCGACTACTGGAGACTCTAG

Protein sequence :
MNEQTSFDDIASGRTAVAVVGLGYVGLPLAVALARHFRVIGFDIQQNRVDELSSGHDRTGEVDDASLAATPALFTTDAAR
LGEAGVIIVAVPTPIDNHRNPDLGPVEKSSITVGRHMKAGCVVVYESTVYPGVTEEVCVPILERESGLVFGRDFTVGYSP
ERINPGDKVHTLETIMKIVSGSDAATADLLEKVYGSVVTAGIHKAASIKVAEAAKVIENTQRDLNIALMNELSIIFDRLG
IDTLEVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLTFKAEELGYHPQVILAGRRINDGMGKHVAEMTVKRMIRSGCRVA
GARVGVLGLTFKENVPDLRNTRVIDVVRELEEYGVTVLVHDPFADPAEAMHEYGLTLAHLKDFQQLDALVVTVPHDVYRA
MDLVQVRRWCASSGTPPLLDVRGTFNPGTAREAGFDYWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-105 58
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-96 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-96 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dvul_0210 YP_965661.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 2e-96 56