|
Name : Dvul_2027 (Dvul_2027) Accession : YP_967470.1 Strain : Desulfovibrio vulgaris DP4 Genome accession: NC_008751 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2362378 - 2363733 bp Length : 1356 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; KEGG: dvu:DVU0959 replicative DNA helicase DNA sequence : TTGCGTCGTGTGCCCCCCCACAGCATAGAGGCCGAACAAGCCGTGCTGGGGGGTGTTTTCTTGAAGAACAGCATCCTCCA CACCCTCGTGGATACGCTCACGGCGGAGGACTTCTACCTCCCCGCCCACCAGATGCTGTTCGAGAGCTTTCTTGAACTCT ATCGCAAGAACGCCCCCATCGACCTCGTTTCCGTCGCCGAACACCTCAAGGCGCATGGGAATCTGGAAGCCGTCGGCGGG GCCATCTATCTTGCCGAACTTGCACAGGCCGTCGTCAGCGCCGCCAATGCCGAATACTACGGCACCATCGTCCGCGACAA GTCGCTGCAACGTTCGCTCATATCCGCCTGTTCGGACATCATCAGCAACTGCTTCGACGCCTCGCGCGAAGTGGGCAGCC TGCTTGACGAATCGGAACAGGCCGTGTTCGCCATTTCGGAACGGACAAGCGGCAAGGTCTTCCGCAGTTCGAAGGAACTG GTGAAGAAGGTCTTCGAAGAACTGGAGAAACGCGTCGAGCGCAAGGAACTGGTGACGGGTGTCACCACGGGCTACGTCAA GCTCGACCAGATGACCTCCGGCTTCCAGGGGTCCGACCTCATCATCGTCGCTGCCCGTCCTTCCATGGGCAAGACGGCGT TCTCGCTGAACATGGCGATGCGTGCCGCGATCAACCAGAACGTACCTGTGGCGGTGTATTCGCTCGAGATGTCGATGGAG CAGTTGATGATGCGTATGCTCTGTTCCTTCGGCAAGGTCGACCTTTCGAAGCTTCGCAAGGGTTTTCTCGATGACGAGGA CTGGAAGCGCCTCTATGAGGCCGCCGATGTACTCGAGCGTGCGCCCATCTACATCGACGACACGCCCGCGTTGACGACAC TGGAGTTGCGTGCCCGTACCCGGCGCCTCCGCGCCGAACGTGGCGTGGGGCTGGTGATGGTCGACTACCTTCAGCTCATG CGCTCCAGTCGACGCACCGATTCGCGCGAACTCGAAATCTCCGACATCTCGCGGTCCCTCAAGGCCCTCGCCAAGGAACT GAACATCCCCGTCATCGCCCTCTCGCAGCTCAACCGCAAGGTCGAAGAACGGACGAACAAACGTCCCATGCTCTCCGACC TTCGCGAATCGGGCGCCATCGAGCAGGACGCCGACATCATCATGTTCATCTACCGCGACGACGCCTACAACAAGCGCGAC GACAACCCGCGCAAGGGCATTGCCGAGATCATCATCGGCAAGCAGCGTAACGGCCCGACGGGCACTGCTGAACTCGCCTA CCTTTCGGCGCACACCGCGTTCGAAGACCTCGACCCCAACTGGGTCCCGCCGCCTTCCGAGGATTACGGGGAGTAG Protein sequence : MRRVPPHSIEAEQAVLGGVFLKNSILHTLVDTLTAEDFYLPAHQMLFESFLELYRKNAPIDLVSVAEHLKAHGNLEAVGG AIYLAELAQAVVSAANAEYYGTIVRDKSLQRSLISACSDIISNCFDASREVGSLLDESEQAVFAISERTSGKVFRSSKEL VKKVFEELEKRVERKELVTGVTTGYVKLDQMTSGFQGSDLIIVAARPSMGKTAFSLNMAMRAAINQNVPVAVYSLEMSME QLMMRMLCSFGKVDLSKLRKGFLDDEDWKRLYEAADVLERAPIYIDDTPALTTLELRARTRRLRAERGVGLVMVDYLQLM RSSRRTDSRELEISDISRSLKALAKELNIPVIALSQLNRKVEERTNKRPMLSDLRESGAIEQDADIIMFIYRDDAYNKRD DNPRKGIAEIIIGKQRNGPTGTAELAYLSAHTAFEDLDPNWVPPPSEDYGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 8e-74 | 47 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-74 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-74 | 45 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 4e-70 | 45 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 9e-69 | 44 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-60 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-66 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-66 | 41 |
