Gene Information

Name : Dvul_2027 (Dvul_2027)
Accession : YP_967470.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2362378 - 2363733 bp
Length : 1356 bp
Strand : -
Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; KEGG: dvu:DVU0959 replicative DNA helicase

DNA sequence :
TTGCGTCGTGTGCCCCCCCACAGCATAGAGGCCGAACAAGCCGTGCTGGGGGGTGTTTTCTTGAAGAACAGCATCCTCCA
CACCCTCGTGGATACGCTCACGGCGGAGGACTTCTACCTCCCCGCCCACCAGATGCTGTTCGAGAGCTTTCTTGAACTCT
ATCGCAAGAACGCCCCCATCGACCTCGTTTCCGTCGCCGAACACCTCAAGGCGCATGGGAATCTGGAAGCCGTCGGCGGG
GCCATCTATCTTGCCGAACTTGCACAGGCCGTCGTCAGCGCCGCCAATGCCGAATACTACGGCACCATCGTCCGCGACAA
GTCGCTGCAACGTTCGCTCATATCCGCCTGTTCGGACATCATCAGCAACTGCTTCGACGCCTCGCGCGAAGTGGGCAGCC
TGCTTGACGAATCGGAACAGGCCGTGTTCGCCATTTCGGAACGGACAAGCGGCAAGGTCTTCCGCAGTTCGAAGGAACTG
GTGAAGAAGGTCTTCGAAGAACTGGAGAAACGCGTCGAGCGCAAGGAACTGGTGACGGGTGTCACCACGGGCTACGTCAA
GCTCGACCAGATGACCTCCGGCTTCCAGGGGTCCGACCTCATCATCGTCGCTGCCCGTCCTTCCATGGGCAAGACGGCGT
TCTCGCTGAACATGGCGATGCGTGCCGCGATCAACCAGAACGTACCTGTGGCGGTGTATTCGCTCGAGATGTCGATGGAG
CAGTTGATGATGCGTATGCTCTGTTCCTTCGGCAAGGTCGACCTTTCGAAGCTTCGCAAGGGTTTTCTCGATGACGAGGA
CTGGAAGCGCCTCTATGAGGCCGCCGATGTACTCGAGCGTGCGCCCATCTACATCGACGACACGCCCGCGTTGACGACAC
TGGAGTTGCGTGCCCGTACCCGGCGCCTCCGCGCCGAACGTGGCGTGGGGCTGGTGATGGTCGACTACCTTCAGCTCATG
CGCTCCAGTCGACGCACCGATTCGCGCGAACTCGAAATCTCCGACATCTCGCGGTCCCTCAAGGCCCTCGCCAAGGAACT
GAACATCCCCGTCATCGCCCTCTCGCAGCTCAACCGCAAGGTCGAAGAACGGACGAACAAACGTCCCATGCTCTCCGACC
TTCGCGAATCGGGCGCCATCGAGCAGGACGCCGACATCATCATGTTCATCTACCGCGACGACGCCTACAACAAGCGCGAC
GACAACCCGCGCAAGGGCATTGCCGAGATCATCATCGGCAAGCAGCGTAACGGCCCGACGGGCACTGCTGAACTCGCCTA
CCTTTCGGCGCACACCGCGTTCGAAGACCTCGACCCCAACTGGGTCCCGCCGCCTTCCGAGGATTACGGGGAGTAG

Protein sequence :
MRRVPPHSIEAEQAVLGGVFLKNSILHTLVDTLTAEDFYLPAHQMLFESFLELYRKNAPIDLVSVAEHLKAHGNLEAVGG
AIYLAELAQAVVSAANAEYYGTIVRDKSLQRSLISACSDIISNCFDASREVGSLLDESEQAVFAISERTSGKVFRSSKEL
VKKVFEELEKRVERKELVTGVTTGYVKLDQMTSGFQGSDLIIVAARPSMGKTAFSLNMAMRAAINQNVPVAVYSLEMSME
QLMMRMLCSFGKVDLSKLRKGFLDDEDWKRLYEAADVLERAPIYIDDTPALTTLELRARTRRLRAERGVGLVMVDYLQLM
RSSRRTDSRELEISDISRSLKALAKELNIPVIALSQLNRKVEERTNKRPMLSDLRESGAIEQDADIIMFIYRDDAYNKRD
DNPRKGIAEIIIGKQRNGPTGTAELAYLSAHTAFEDLDPNWVPPPSEDYGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 8e-74 47
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 7e-74 45
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-74 45
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-70 45
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 9e-69 44
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-60 42
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 9e-66 41
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 9e-66 41