Gene Information

Name : Dvul_0017 (Dvul_0017)
Accession : YP_965468.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 26433 - 27812 bp
Length : 1380 bp
Strand : +
Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: dvu:DVU3381 transcriptional regulatory protein ZraR

DNA sequence : 
ATGAGCGACGTGACCGTTCTCATCGTGGATGACGATGTGGCTCACCGCACCATGCTGCGTACCATGCTGCGCGGCTGGGG
CTATGCCACCGACGAGGCCGACGACGGCGAGACCGCCGTCGAGAAGGTGCGCGAAAAGGCCCGCGATGCGGTGCTCATGG
ATGTGCGCATGGCCCGCATGGGCGGTATCGAGGCGTTGCGGCGCATCGTGGAGTACAACCCCGCCGTGCCCGTTCTCATC
ATGACGGCATACTCCTCTGTGGAGACGGCAGTGGAGGCCCTGCGGCTCGGGGCCTACGACTACCTGACCAAGCCGCTGGA
CTTCGATGTGCTGCGCCATACGCTCGAGCGCGCCCTCGACCATACCCGCCTCGTGTCCGAGAACCGTGAGCTCAAGAGCC
GCCTCGACGACGCGGCACGGGCACCGGGCATCATCGGGCGCAGTGCACCCATGCGTGAGCTGGCCGAACTCGTCGCCACC
GTCGCGCCGTCCGAGGCCACGGTGCTCATCACCGGAGAGTCGGGAACAGGCAAGGAACTGGTGGCGCGGTCGCTCCATGC
GGGCAGCCGTCGCAGCGCAAAGCAACTGGTGACGGTGAACTGCGCCGCACTCTCCGAATCGCTCCTCGAATCGGAGTTGT
TCGGACATGAGCGGGGAGCCTTCACCGGGGCCGACAAGCGCCGCGACGGGCGCTTCGTTCAGGCCGACGGCGGTACGCTC
TTCCTTGACGAGATAGGCGAACTGCCCCTGCTGTTGCAGGCCAAACTGCTGCGGGCCTTGCAACAGGGAGAGATACAGCG
CGTGGGCAGCGACGTTCCGCTGACGGTGGACGTGCGGCTTCTTGCCGCCACCAACCGCGACCTGCGCGAAGAGGTGGCCG
CCGGGCGCTTTCGCGAAGACCTGTTCTATCGCCTCAATGTCATCGGCATCCATATGCCCTCGCTGCGTGAGCGGCCCGAT
GACATCCCCCTGCTGGCGGCGCATTTCCTCGACCGTTACGCGGAACGCAACCGCAAGCACCTCAAGGGTTTCACCCCGCA
GGCCATGGACATGCTGCTCAAGCACCCGTGGCCGGGCAACGTGCGTGAACTCGAGAACGCCGTGGAGAGGGCTGTCATCA
TGGCCACGGGTGACTGGGTCGGCGAACGTGAACTGCCCATGTCCCTGCGCGGGGCGGGGGGCGCCGACCCAGCCGTCGCC
GATGCCGCACTGCCCACCGGTCAGGACCCCTACGCCGGTCTCTCACTGGAAGACCTCGAGCGTCGCGCCATCGTCGCCAC
CCTGCGCGAGACGGGTGACAACAAGAGTGAAGCCGCAAGGCGTCTCGGCATCACCCGTGCCACACTGCACAACAAACTCA
AGAAGTACGACCTCGAATGA

Protein sequence : 
MSDVTVLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEALRRIVEYNPAVPVLI
MTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLVSENRELKSRLDDAARAPGIIGRSAPMRELAELVAT
VAPSEATVLITGESGTGKELVARSLHAGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTL
FLDEIGELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFYRLNVIGIHMPSLRERPD
DIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRELENAVERAVIMATGDWVGERELPMSLRGAGGADPAVA
DAALPTGQDPYAGLSLEDLERRAIVATLRETGDNKSEAARRLGITRATLHNKLKKYDLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 1e-43 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dvul_0017 YP_965468.1 Fis family transcriptional regulator BAC0467 Protein 3e-117 60
Dvul_0017 YP_965468.1 Fis family transcriptional regulator BAC0089 Protein 7e-81 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dvul_0017 YP_965468.1 Fis family transcriptional regulator VFG0116 Protein 2e-56 43
Dvul_0017 YP_965468.1 Fis family transcriptional regulator VFG1249 Protein 6e-57 43
Dvul_0017 YP_965468.1 Fis family transcriptional regulator VFG1214 Protein 1e-59 41