Gene Information

Name : Dvul_1473 (Dvul_1473)
Accession : YP_966918.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Unknown
Product : PBSX family phage portal protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 1767151 - 1768194 bp
Length : 1044 bp
Strand : +
Note : TIGRFAM: phage portal protein, PBSX family; PFAM: phage portal protein; KEGG: hch:HCH_00397 phage portal protein, PBSX family

DNA sequence :
ATGAGCAGAAGAAAGAAGGCCCGCCTCCACAGCACCAGCCATACCCCGCAGGGCGCGACCGCCGATGCCACGCCCGCGAA
CGCCGTCGCCTTCAAATGGGGCGACCCGGAACCCGTGCTCGCTGGGGCCGTGTACGACAACCTCGGCGTATGGCTGCTGG
ACAACGGACGCTACTACGGCCCGCCCGTGCCGCTGACGGGCCTTGCCCGGTTGCTGCGCGCCAACGCCTACCACGGCCCC
ATCCTCGAGTTCAAAGCCAACATGTACATGCGTGGCTTCGTGCCCTCTGCTGCCCTGACGCGGCGCGACATGCACGCCGC
CGTCACCGACTATGCCGTGTTCGCCAACGCCTATCTGCTGAAGGCCCGTAACTGGTACGGCGAGGTGGTAGCCCTGCGGC
ACCTGCCCGCCATCAACATGCGCCGCATGAAGGGTGAGAACTGCTATGGCCTGCTGGACGCCGCCGGGCAGCTGACCGCC
TTCGACCCCGGCGACGTGGTACACCTGAAGAACTACGACGTATGCCAAGGCATCTACGGCTTGCCCGCCTACCTCGGGGC
CATACAGAGCATGCTGCTGAACGAAGACGCCACGCTCTTTCGTCGGCGTTATTACCGCAACGGCGCGCACATGGGCTACG
TGTTCTATTCGGCCTCCAACGCCATGCAGCACGAAGACACCGAACGCATCCGCGCCGCCATCGAGGGCAGCCGGGGCATA
GGCAACTTCCGTAACATGTTCCTGCACATACCCAACGGGCGCGAGAAGGACATCCAGATATTGCCCGTGGGCGACTTCAG
CACCAAAGACGAGTTGGAGAAGATCAAGAACATAAGCCGCGACGACATCATCGCCGCGCACCGCATTCCGCCCGCCATGG
CAAGCATCATCCCCACGGCGGCGGGTGGGCTTGGCGACATCACCAAGGCCGATGCCGTGTACCAGCGTAACGAGGTGCAG
CCCGTGCGCGAGGTGCTGCTTGAAGTGAACGACCACCTGCCCCCGGCGTTGCAGGTGCGGTTCGACGAGCAGGAGCCTGT
ATAG

Protein sequence :
MSRRKKARLHSTSHTPQGATADATPANAVAFKWGDPEPVLAGAVYDNLGVWLLDNGRYYGPPVPLTGLARLLRANAYHGP
ILEFKANMYMRGFVPSAALTRRDMHAAVTDYAVFANAYLLKARNWYGEVVALRHLPAINMRRMKGENCYGLLDAAGQLTA
FDPGDVVHLKNYDVCQGIYGLPAYLGAIQSMLLNEDATLFRRRYYRNGAHMGYVFYSASNAMQHEDTERIRAAIEGSRGI
GNFRNMFLHIPNGREKDIQILPVGDFSTKDELEKIKNISRDDIIAAHRIPPAMASIIPTAAGGLGDITKADAVYQRNEVQ
PVREVLLEVNDHLPPALQVRFDEQEPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 5e-53 42
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 5e-53 42