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Name : Dvul_1290 (Dvul_1290) Accession : YP_966736.1 Strain : Desulfovibrio vulgaris DP4 Genome accession: NC_008751 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATPase ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1576727 - 1579324 bp Length : 2598 bp Strand : + Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: dvu:DVU1874 ATP-dependent Clp protease, ATP-binding subunit ClpB DNA sequence : ATGGATATCGGAAAGTTCACCGAGAAGTCACAGCAGGCACTGGCAGAGGCCCAGAACATCGCCGTCCGCTTCGGTCATCA GGAAGTGGATGCCGAACACCTTGCCGACGCCCTCGTCAGGCAGGAGCAGGGGCTTGTGCCCAGATTGCTCGACCGTATGG GGCAGAAGCCCGAAGCCTTTGCCGAGGCGCTCGAGCGCGAACTCGGCAAGCGTCCCGCCGTGAGCGGGCCGGGGGCGGCA CCGGGGCAGATATTCGTCTCGAAGCGACTCAACGCCGTACTGGTGAAGGCGCAGGACTTCGCGCGGCAGCTGAAGGACGA ATATGTCAGCGTAGAGCATATCTTCTGTGTGCTTCTCGAAGAACCCGCTTCCACCATCATGGGGCGCATCGCCCGCGAGT TCTCGCTCAGCCGCGAGAAGGTGCTCGGTGTGCTGGAGGATGTGCGCGGTTCGCAGCGCGTCACGTCCGCCAACCCTGAA GACACCTACGAGGCGCTTCAGAAGTATGGTCGCGACCTCGTGGAGGAGGCGCGCAAGGGCAAACTCGACCCCGTCATCGG GCGTGACGCCGAGATTCGCCGGGTCATCCGCATCCTTTCAAGGCGCACCAAGAACAACCCCGTGCTCATCGGCGAGGCTG GCGTGGGCAAGACGGCCATCGTCGAAGGTCTGGCCCACCGCATCCTCAAGGGCGACGTGCCCGAAGGCCTGAAGGAGCGT GGCCTGTTCGCGCTGGACATGGGGGCACTCATCGCCGGGGCCAAGTACCGCGGCGAATTCGAGGAACGCCTCAAGGCGGT GCTCAAGGAGGTCGAGAAGTCCGAGGGCCGCATCATCATGTTCATCGACGAGTTGCACACCATCGTCGGTGCGGGCAAGA CCGACGGCGCCATGGACGCCAGCAACCTGCTCAAGCCCATGCTGGCGCGGGGCGAGTTGCATTGCATCGGCGCGACCACC CTCGACGAATACCGCAAGTACATCGAGAAGGACCCGGCCCTTGAACGGCGCTTCCAGCCTGTGCTCGTCGATGAGCCGAC CATAGAGGACGCCATCTCCATCCTGCGTGGCCTGAAGGAGCGTTTCGAGGTGCACCACGGCGTGCGCATCAGCGACTCGG CCATCGTCGAAGCGGTGACGCTCTCGCATCGGTACATCACCGACAGGCAACTGCCGGACAAGGCCATCGACCTCATCGAC GAGGCTGCCGCCCTCATCCGTACCGAGATAGATTCGCTGCCCGCCGACCTTGACGAGGCCAACCGCAAGATCATGCAGCT TGAGATCGAGCGTGAAGCCTTGCGGCGCGAGACCGATGTCGCCTCTCGAGAACGCCTGGAACGGCTGGAGAACGAACTCG CCGACCTGCGGGCAGAGCAGACGGCCCTGCTTTCGCAATGGGAGCGCGAGAAGGGTTCCATCGACCACGTGCGGAGCATC AAGGAGGATATCGAGCGCACTCGTCACGCCATCGAGGAGGCCGAGCGCGCCTACGACCTCAACCGGGCGGCGGAGTTGAA GTATTCGCGCCTGCTTGAACTCGAGCGGCAACTCGAATCCGCCGAGAAGGGCGGGCATGACGAGACGCGGCTGCTCAAGG AGGAGGTGCGTCCTGACGACATCGCCGAAATCGTCGCGCGGTGGACGGGTATCCCGGTGACACGCCTGCTCGAATCGGAG CGCGAGAAGCTGTTGCGCCTAGCCGACGTGCTGCATGAGCGCGTAGTCGGGCAGGAAGAGGCCGTAGACGCCGTATCCGA AGCTGTGCTTCGTGCGCGTGCCGGGCTCTCAGACCCTTCGCGGCCCATCGGTTCGTTCATTTTCCTCGGTCCCACGGGCG TCGGCAAGACTGAACTTTGCAAGACCCTGGCGGAGGCCCTGTTCGATACCGAAGAGAACATCGTTCGCCTCGACATGAGT GAATACATGGAGAAGCACGCGGTGGCGCGGCTCATCGGAGCCCCTCCCGGCTATGTGGGCTACGACGAGGGCGGGCAACT CACCGAGGCGGTGCGGCGCAAGCCCTACAGCGTGGTGCTGTTCGACGAGGTAGAGAAGGCCCACCCTGATGTGTTCAACA CCCTTCTTCAGATACTGGACGACGGGCGGCTGACAGACAGCCACGGGCGGACAGTGGACTTTCGCAACACCATCATCATC ATGACCTCGAACATCGGCTCACCCTACATGCTGGACGGCATCAGCGAAGGGGGCGAGTTCCTTTCCGGCGTTCGTGAGAA GGTGATGGAGGAGTTGCGCCGCCACTTCCGGCCCGAGTTCCTGAACCGCGTGGATGAGACGGTGCTCTTCAAGCCGTTGC TGCCCGCCCAGATAGCCCGCATCGTCGAGCTTCTTCTTGGCAGGTTGCGCGGGCGCCTTGCCGAGCGCAAGATCGACATC CGTCTCGGTGATGTGGCGCGCGACTTCATCGCCAAGGCCGCCTACGACCCCGTGTACGGTGCCCGGCCGTTGCGGCGCTA CCTGCAACACAACATCGAAACGCCATTGGCCCGCAAGCTCATCGCCGGTGAATTGCGCGATGGCACGGCGGTGGAAGTGG ACGTGGTCGATGATGCCCTGTCGTTCCGAATCGAATAA Protein sequence : MDIGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEAFAEALERELGKRPAVSGPGAA PGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHIFCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQRVTSANPE DTYEALQKYGRDLVEEARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEGLKER GLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGELHCIGATT LDEYRKYIEKDPALERRFQPVLVDEPTIEDAISILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLID EAAALIRTEIDSLPADLDEANRKIMQLEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKGSIDHVRSI KEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLLKEEVRPDDIAEIVARWTGIPVTRLLESE REKLLRLADVLHERVVGQEEAVDAVSEAVLRARAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMS EYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIII MTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDI RLGDVARDFIAKAAYDPVYGARPLRRYLQHNIETPLARKLIAGELRDGTAVEVDVVDDALSFRIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-96 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dvul_1290 | YP_966736.1 | ATP-dependent Clp protease ATPase ClpB | VFG2084 | Protein | 8e-100 | 43 |
