Gene Information

Name : pbpG (Sputw3181_0898)
Accession : YP_962302.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : D-alanyl-D-alanine endopeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 1024272 - 1025240 bp
Length : 969 bp
Strand : +
Note : specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7

DNA sequence : 
ATGAAGATCAGATCTTTACTCAGTAGTTTTATCTTTGTCTGCAGCAGTTGTACTGTTGCCGCGACAGCATATTGTGCCGA
ATCGGCCTCTGTCACTACGAAAAGTACCGCTTCTAAATCATCTGCCTCAGCAAAGCCTGTTTTAAATAAACAAGAAGTCG
CGGCGAACAGTGCTTTGGTGGTTGATCTCAAAACCAATGAGGTCCTTTATTCGAGTAATCCTAATGCTGTTATGCCAATA
GCCTCTGTGACTAAATTAATGACGGCTATGGTGACGTTAGATGCCAAATTGCCAATGGATCAGAAGCTCGCTGTTAATAT
TAGCGATACCAAAGAAATGCGTGGTGTTTACTCTCGGGTACGTATCGGTAGCGAAATTACCCGTAAAGAGATGTTGTTGT
TGACCTTGATGTCTTCAGAAAATCGCGCCGCTGCAAGCCTTGCTCATCATTATCCCGGTGGACATAAGGCCTTTATTAAG
GCGATGAATGCCAAAGCGAAAGCATTAGGTATGAAAAATACTCGTTATGTTGAACCGACGGGCTTATCTCATAAAAATGT
ATCTAGTGCGAGCGATCTTATCGTTCTGCTTAAAGCGAGTGAGAAATACCCTATGCTTGGTGAGTTGAGTGCCACAGAGA
AGAAAACGGTGACGTTTGGCAAACCTAAGTACAGTTTAGATTTTCGTAATACAAATCGCTTGGTTTACAAAGATAACTGG
AATATTCATCTTACAAAAACGGGCTTTACCAATGCCGCAGGCCATTGCTTAGTGATGCGTACTGAAATGGCAAAACGTCA
AGTGGCTTTTGTTGTGCTTGATGCCTACGGCAAATATACCCATCTAGCCGATGCAAACCGTTTACGTAATTGGTTAGAAA
CGGGTAAGGTGACACCGATACCTACAGAAGCTAAGCAGTATAAAAAACAGCGAAGTACTCAGCAGATAGCCAAGGTCAGT
GGGACCTAG

Protein sequence : 
MKIRSLLSSFIFVCSSCTVAATAYCAESASVTTKSTASKSSASAKPVLNKQEVAANSALVVDLKTNEVLYSSNPNAVMPI
ASVTKLMTAMVTLDAKLPMDQKLAVNISDTKEMRGVYSRVRIGSEITRKEMLLLTLMSSENRAAASLAHHYPGGHKAFIK
AMNAKAKALGMKNTRYVEPTGLSHKNVSSASDLIVLLKASEKYPMLGELSATEKKTVTFGKPKYSLDFRNTNRLVYKDNW
NIHLTKTGFTNAAGHCLVMRTEMAKRQVAFVVLDAYGKYTHLADANRLRNWLETGKVTPIPTEAKQYKKQRSTQQIAKVS
GT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 4e-44 45
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 4e-44 45