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Name : Sputw3181_0647 (Sputw3181_0647) Accession : YP_962052.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 710532 - 712106 bp Length : 1575 bp Strand : + Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: shm:Shewmr7_3447 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor DNA sequence : ATGAGAAAAAACTTACCAGTTACACAGCGTGAATATGACTATCCGGCAGATTGGATTTTATTATCGACCACGGATACTCA GAGTCATATCACCTACGCGAATGCCTCATTTTGTAAGGTCTCCGGTTATGAGCTCGATGCCATGTTAGGCCAGACCCATA ATATGGTTCGTCATCCGGATATGCCACCACAGGCATTTGAAGATCTGTGGAAAAAAATCAAAAAAGGGGAGCCATGGAAG GGCATCGTCAAAAACCGTTGTGCCAATGGCGATCATTATTGGGTGGATGCTTATGTATCACCTATTTCCATTAATGGCCA AGTCGTTGAGTTTCAATCGGTACGTACTAAGCCTAGTCGCGAGCAAGTTAAGCGAGCAGAAGCTGCCTATAGTGAATTGA ATAAAACAGGCAGTATCAAGGCATTAAAGCTTACCCTAAGTATGCCAACCAAGTTACTGCTGATCGCTTTAATTGCTTTG CTACCTGTTTTGTACCTAGCGATTGAAGTTGGATTGGTTGGATTTATTGCTTTTATCTTTAGCTTCATTGTATTGCTTGT GGGAGGGCATCTCGTGCTTGGTCGCTACTATGCCTTAGTTGAAAAAGCGAAGCGGATCTACGATAGCCCTCTGATGGCAC ATATTTATAGTGGTAACTGTGATGATCTTGGCGCCATAGATTTGGCCCTACAAATGCAGAGTTCAGAGCTTAAGTCGATT CTTGGCCGCGCATCAGACTCCTGCTATAACGTCGCTGAGCAGGCTAAAGTTTCGGCGGCTAAGGGAAAAGAAATCCAGAG AACGAGTCAGTCTCAGCTTTCTGAAATAGAACAAGTTGCTACTGCCATGCAGCAAATGACCGCCACGTTAGGGGATATGT CATCCAATTGCGCCGATACCGCCAGTGCGTCTCAAATGGCATCGGCCGAAACCATTAATGGTGATAAAAGGGTTGCAAGT ACGATTAGCTCTATTCAGGCTATGGCTGAGCAGTTACAGGAGACTGCTAAGGTGATTACTCAATTAGAAAGCCACAGTAA AGATATAGGTACTGTGCTTGACGTGATTCAGAGTATTGCGGGTCAAACTAATTTACTGGCGCTGAATGCGGCAATTGAAG CGGCTCGAGCCGGAGAGCAGGGGCGAGGATTTGCAGTGGTGGCCGATGAAGTGCGTGCATTAGCGCAACGTACCCATGAT GCAACTAAAGAAATTCACAGCATGATTAGCTTATTGCAGCAAGGAACCAGTAAGGCCGTTGAGAGTATGCAGCATGGCTT AGTGGCGGCCTCACAATGTATTTCGACTGCCGATCTGGCGGGGGCTGCGCTACAAACGATTCGTGAAGCCATCGCGACTA TCACCGATATGACTCACCACATTGCTAGTGCTGTGGAAGAACAATCGAGTGTGGCGAATGAAATGAACCGAAGTGTGGTG AATACGGCGCAGTTTACCCATTTAAGTCATCAGCTTGGCAGTGAAATGGTGAGTTTAAATGATGATGTTATTCAAGAAAT GGATTCCCATTCGGTATTAGTTGGTCAATTCTTAAAGCGTAGTTTTAAGGTTTAA Protein sequence : MRKNLPVTQREYDYPADWILLSTTDTQSHITYANASFCKVSGYELDAMLGQTHNMVRHPDMPPQAFEDLWKKIKKGEPWK GIVKNRCANGDHYWVDAYVSPISINGQVVEFQSVRTKPSREQVKRAEAAYSELNKTGSIKALKLTLSMPTKLLLIALIAL LPVLYLAIEVGLVGFIAFIFSFIVLLVGGHLVLGRYYALVEKAKRIYDSPLMAHIYSGNCDDLGAIDLALQMQSSELKSI LGRASDSCYNVAEQAKVSAAKGKEIQRTSQSQLSEIEQVATAMQQMTATLGDMSSNCADTASASQMASAETINGDKRVAS TISSIQAMAEQLQETAKVITQLESHSKDIGTVLDVIQSIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAQRTHD ATKEIHSMISLLQQGTSKAVESMQHGLVAASQCISTADLAGAALQTIREAIATITDMTHHIASAVEEQSSVANEMNRSVV NTAQFTHLSHQLGSEMVSLNDDVIQEMDSHSVLVGQFLKRSFKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 8e-71 | 43 |
