Gene Information

Name : Sputw3181_0063 (Sputw3181_0063)
Accession : YP_961470.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 79710 - 80873 bp
Length : 1164 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: son:SO4687 UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGAATATTGTTGTTGTGGGGATGGGCTATGTGGGCCTATCAAATGCCGTCTTATTGGCGCAGCAAAACCAAGTCACTGC
AATTGATTTAGTTCCTGAACGTGTCAAGCAAGTTAACGAGCGTAAATCCACTGTGGTCGATGAATTAATCGAAGACTATC
TGCAAAACAAACCGTTGAATTTAACTGCAACAATGGAAAATGTGGCCTTTCAATCGGCTGACTTTGTGATTATTGCGACT
CCAACAGACTACGATCCTCAGACTAATTATTTTAATACCCATTCGGTTGAAAGCGTCATTCGTGATGTACTCGCTGTTAA
TCCTGATACGACGATTATCATCAAATCGACTGTCCCCGTCGGCTATACCGCAGCATTAAGGCACAAGTTTAAGAGCGACA
ACATACTCTTTTCTCCAGAGTTTTTACGCGAAGGTAAAGCCTTGTATGACAACCTTCATCCCTCACGGATCGTCGTCGGT
GAACGCTCGGCGCGTGCCCAAGTCTTTGCAGACCTTTTAGCCAAGGCGGCAATCAAGCAAGATATTCCTATTTTGCTGAC
CGATAGCACCGAAGCTGAAGCGATTAAGTTATTTGCTAATACATTTCTCGCCATGCGGGTCGCCTACTTTAACGAGCTCG
ATACCTATGCAGAGAGTCGAGGATTAAATACTCGCCAGATTATTGAGGGGGTTAGCCTCGATCCGCGTATTGGTGATTAT
TACAACAATCCTTCTTTTGGCTATGGCGGGTACTGTCTTCCGAAAGACACTAAGCAATTACTGGCTAACTACAATGATGT
CCCAAACAATTTAATCAGTGCCATTGTCGACTCAAACACCACACGTAAAGACTTTATCGCCGACGCTATTATCCGTAAGC
AGCCAAAATGTGTAGGAATTTATCGTTTGATCATGAAAGCCGATTCAGACAATTTCCGCGCCTCAGCAGTGCAAGGCGTG
ATGAAGCGCATTAAAGCGAAAGGCATTGAAGTCGTCGTGTTTGAGCCTGTACTTAAAGAAGATTATTTTTTCAAATCTCG
CGTGATGAGAGACTTAACTGAATTTAAGTCACTATGTGATGTGATCGTCTCCAACCGTATGGTTGATGAACTCAATGATG
TTGCGGATAAAGTCTATACCCGAGATCTATTTCACCATGATTAA

Protein sequence : 
MNIVVVGMGYVGLSNAVLLAQQNQVTAIDLVPERVKQVNERKSTVVDELIEDYLQNKPLNLTATMENVAFQSADFVIIAT
PTDYDPQTNYFNTHSVESVIRDVLAVNPDTTIIIKSTVPVGYTAALRHKFKSDNILFSPEFLREGKALYDNLHPSRIVVG
ERSARAQVFADLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAESRGLNTRQIIEGVSLDPRIGDY
YNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIADAIIRKQPKCVGIYRLIMKADSDNFRASAVQGV
MKRIKAKGIEVVVFEPVLKEDYFFKSRVMRDLTEFKSLCDVIVSNRMVDELNDVADKVYTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-91 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_0063 YP_961470.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 2e-100 55