|
Name : Sputw3181_0416 (Sputw3181_0416) Accession : YP_961821.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : transposase, IS204/IS1001/IS1096/IS1165 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3464 EC number : - Position : 456546 - 457625 bp Length : 1080 bp Strand : + Note : PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase, TnpA DNA sequence : GTGGTCCGCCGCCGATACACCTGCCGGGCCTGCAAGACAACATTCAGGCCCCAGCTACCGGAGATGGTGGACGGATTCCG TATGACACTGCGGCTGCATGAGTACGTGGAGAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCC TGGACGAGAAGACGGTGCGCGACATCTTCAACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGC ATCCTGGGCATTGACGAGCTATACCTGAACAAGCGCTACCGCTGCATTCTGACCAACATTGAGGAGCGAACCCTGCTCGA CCTGCTGGCCACCCGCCGCCAGAACGTGGTGACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCA GCATGGACATGTGGAACCCCTACCGGGCAGCGGTCAAGGCTGTGCTGCCCCAGGCCCGTATCGTGGTCGATAAGTTCCAT GTGGTGCGCATGGCCAACGATGCCCTAGAGAGAGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCGTCCCAGAGCCGGAC TCTCAAGGGAGACCGGAAAATCCTGCTGAAACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGA CAGGCGCGTTCCCGCAACTGCTGGCCGCCTACGAGCACAAGGAGCGCTTCTACGGCATCTGGGACGCCACCACACGGCTC CAGGCAGAAGCCGCCCTGGACGAGTGGATAGCCACCATCCCGAAGGGCCAAAAGGAAGTCTGGAGCGATCTGGTCAGGGC AGTGGGAAACTGGCGCGAAGAGACCATGACCTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCA ACCGACTGGCCAAGGACAAGAACCGTGAAGGGCGCGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACG AAGCACAAGAAGAAGGCACCGACTGCGAAGGTCTCTCCTTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTCGC AGAGGAACTCAACTACGGAGTCGATCTATCAACCATCTGA Protein sequence : MVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPR ILGIDELYLNKRYRCILTNIEERTLLDLLATRRQNVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFH VVRMANDALERVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRL QAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTT KHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tpnA | ADZ05772.1 | transposase | Not tested | AbaR11 | Protein | 2e-161 | 99 |
| tnpA | AGK36656.1 | transposase of ISL3 family | Not tested | AbaR26 | Protein | 2e-161 | 99 |
| tnpA | ACN81032.1 | transposase of ISL3 family | Not tested | AbaR5 | Protein | 3e-161 | 99 |
| tnpA | ACS32044.1 | transposase of ISL3 family | Not tested | AbaR5 | Protein | 3e-161 | 99 |
| 1_52 | CAJ77024.1 | Transposase | Not tested | AbaR1 | Protein | 2e-161 | 99 |
| 1_386 | CAJ77097.1 | Transposase | Not tested | AbaR1 | Protein | 2e-161 | 99 |
| tpnA | ADI24144.1 | transposase | Not tested | AbaR1 | Protein | 2e-161 | 99 |
| Pmu_03510 | YP_005176249.1 | transposase tnpA | Not tested | ICEPmu1 | Protein | 1e-69 | 44 |
