Gene Information

Name : Sputw3181_4090 (Sputw3181_4090)
Accession : YP_965446.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4702837 - 4704054 bp
Length : 1218 bp
Strand : -
Note : PFAM: phage integrase family protein; KEGG: pgi:PG0874 mobilizable transposon, int protein

DNA sequence :
ATGAAGGTATCAGTAAACAAGCGTAATCCTAACTCGAAGGGGCTCCAGCAACTTAGGCTGGTGTACTACTACGGTGTTGT
TGAAGGTGAGGATGGTAAAAAACGTGCAAAGCGCGACTACGAACCTTTAGAGCTCTATCTCTACGAGAACCCAAAGACAC
AAGCAGAGCGTCAACACAATAAAGAAATGTTGCGTCAGGCTGAGGCTGCGCGGTCAGCAAGGCTCGTTGAATCTCACAGT
AATAAGTTCCAACTGGAAGACAGAGTAAAACTTGCTTCGAGCTTTTACGAATACTACGACAAGTTAACTGCCAGCAAAGA
GTCTGGAAGTTCTTCAAACTATTCTATTTGGATCTCAGCAGGTAAACATCTTCGGAGCTATCACGGAAGAGCAGAGCTAA
CTTTTGAAGAACTTGATAAAAAATTCCTAGAAGGGTTTAGGAAATACCTTTTAGAGGAACCGCTAACGAAATCTAAGTCA
AAGCTTGCCAAAAACACGGCCTCTAGTTACTTCAACAAAGTCAGAGCCGCCCTAAATGAAGCGTACAGAGAAGGCATCAT
AAGGGATAACCCAGTCCAGCGAGTAAAAAGTGTCAAAGCAGAAAATACCCAGCGAACCTACCTCACTCTGGATGAAGTTC
GAGCTATGACAAGGGCGGAATGTCGCTATGATGTTCTTAAACGGGCATTTCTTTTTAGTTGCACAACTGGCTTGAGATGG
AGCGATATTCAGAAGCTTACATGGAAAGAAATAGAAGAGTTTCAGGATGGGCACTACAGAATTATTTTCAAGCAGACTAA
ATTACTGAATGCCGGAAACAGCTTAGTCTACTTGGATCTACCAGACTCAGCAGTTAAGCTTATGGGAGAGCGCCAAGATA
AAACCGAGCGAGTCTTTAAAGGGTTGAAATATAGTAGTTACACCAACGTCGCTTTACTACATTGGGCAATGCTAGCAGGC
GTTCAAAAACATGTTACTTTCCACGTTGGCAGACATACATTTGCGGTGGCCCAGCTTAACCGTGGCGTTGATATCTATTC
TCTCTCTCGCCTTCTTGGGCACTCCGAATTGAGAACAACGGAAATTTATGCTGATATCCTTGAAAGTCGCCGGGTAACAG
CAATGAGAGGCTTTCCAGATATTTTTGAAGATAAGGTAAAAGAGCCTGAAACTTGCTGTCCTCACTGCGGAAAATCCGTA
CCCCATAAAACACTTTAA

Protein sequence :
MKVSVNKRNPNSKGLQQLRLVYYYGVVEGEDGKKRAKRDYEPLELYLYENPKTQAERQHNKEMLRQAEAARSARLVESHS
NKFQLEDRVKLASSFYEYYDKLTASKESGSSSNYSIWISAGKHLRSYHGRAELTFEELDKKFLEGFRKYLLEEPLTKSKS
KLAKNTASSYFNKVRAALNEAYREGIIRDNPVQRVKSVKAENTQRTYLTLDEVRAMTRAECRYDVLKRAFLFSCTTGLRW
SDIQKLTWKEIEEFQDGHYRIIFKQTKLLNAGNSLVYLDLPDSAVKLMGERQDKTERVFKGLKYSSYTNVALLHWAMLAG
VQKHVTFHVGRHTFAVAQLNRGVDIYSLSRLLGHSELRTTEIYADILESRRVTAMRGFPDIFEDKVKEPETCCPHCGKSV
PHKTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int ACS32045.1 integrase Not tested SGI2 Protein 5e-179 98
int AGF34959.1 integrase Not tested SGI1 Protein 5e-179 98
int AGF34999.1 integrase Not tested SGI1 Protein 5e-179 98
int AGF35038.1 integrase Not tested SGI1 Protein 5e-179 98
int AGK06906.1 integrase Not tested SGI1 Protein 5e-179 98
int AGK06943.1 integrase Not tested SGI1 Protein 5e-179 98
int AGK06989.1 integrase Not tested SGI1 Protein 5e-179 98
int AAG03003.1 integrase Not tested SGI1 Protein 5e-179 98
int AGK07047.1 integrase Not tested SGI1 Protein 5e-179 98
int ACX47954.1 integrase Not tested SGI1 Protein 5e-179 98