Gene Information

Name : Sputw3181_4089 (Sputw3181_4089)
Accession : YP_965445.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : putative transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 4702472 - 4702840 bp
Length : 369 bp
Strand : +
Note : TIGRFAM: DNA binding domain, excisionase family

DNA sequence :
ATGAATGTAGACATGAATGAAACCTTGAATGCCTTGATAAGCGAAATTGCAGAAATGAAACAATTACTGGCTCAGGTCGT
TGAAAATACGGTGAGTGACGGCAGCAAATCAAACTTACCTCCATCTGATAAAGAATATCTTACCGTCGATGAGGCGGCGG
CATTAGTTGGAGCAAAACGCTCATACATCTACCGCCTGACGCATGAAAAGCGCTTATCGTTTACTAAGCCGGGTGGTAAT
CGGGTGCTAATTAAGCGCTCAGACCTTCAAGCATGGTTGGAAAAGAACAGAGTGAAGTCCCAAGATGAACTTCACCAAGA
TGTTGCAAATTACATTGCGTGCTCACCTCGCAGCCGTAGGGCATCTTAA

Protein sequence :
MNVDMNETLNALISEIAEMKQLLAQVVENTVSDGSKSNLPPSDKEYLTVDEAAALVGAKRSYIYRLTHEKRLSFTKPGGN
RVLIKRSDLQAWLEKNRVKSQDELHQDVANYIACSPRSRRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xis AGF35039.1 excisionase Not tested SGI1 Protein 5e-47 91
xis AGK06907.1 excisionase Not tested SGI1 Protein 5e-47 91
xis AGK06944.1 excisionase Not tested SGI1 Protein 5e-47 91
xis AGK06990.1 excisionase Not tested SGI1 Protein 5e-47 91
xis AAG03002.1 excisionase Not tested SGI1 Protein 5e-47 91
xis AGK07048.1 excisionase Not tested SGI1 Protein 5e-47 91
xis ACX47955.1 xis Not tested SGI1 Protein 5e-47 91
xis ACS32046.1 excisionase Not tested SGI2 Protein 5e-47 91
xis AGF34960.1 excisionase Not tested SGI1 Protein 5e-47 91
xis AGF35000.1 excisionase Not tested SGI1 Protein 5e-47 91