Gene Information

Name : Sputw3181_3732 (Sputw3181_3732)
Accession : YP_965091.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : transposase, IS4 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4266689 - 4267939 bp
Length : 1251 bp
Strand : -
Note : PFAM: transposase, IS4 family protein; KEGG: sak:SAK_2050 IS10R, transposase

DNA sequence :
ATGATCAAATGGTTTCGCCAAAAACTACACTTGGACAACAAGATGCGCGAAGCCAATATCCTACAACATTCTTTACACCA
ATACTGCCCAGAACTTCACCTAAAACGATTAAACAGCTTGATGCTGGCCTCTAAGGCACTGATTGAATGTAAGACACTGA
CCTTGACTGAGTTAGGTCGAAATTTACCAACCACGGCCCGAACCAAGCACAACATCAAGCGCATTGATCGTTTGCTCGGC
AACACGCATCTGCATCAAGAACGGTTAGCTGTCTACCAATGGCATGCCAGCCTCATCTGTTCTGGTAACCCTATGCCGAT
TGTGCTCGTCGATTGGTCAGACATCCGAGAGCATAAACGCATCATGGCTCTGCGCGCCTCAATAGCCTTCAATGGCCGCT
CTATTACCCTGTATGAGAAGTCCTATCCCCTATCAGAACAATGCTCTAAGGCCTCCCACAACGGTTTTTTAGCGGACTTA
GCCAAGATTTTACCTTTGCATGTTACCCCTCTCATCGTGACTGACGCGGGGTTCAAAGTGCCTTGGTACAAAGAGGTTGA
GGCGCATGGTTGGTTTTGGCTAAGCCGTATTCGCGGTACAGTTCAATTTGCAGATATTGGCGCTGAAAATTGGCGTGCAG
TTCGCAGTACACATGACTTGGCCAACGGTCAAGCGAAGAGCCTGGGTTGTAAGACCTTGACCAAAACTAACCCTATCAAT
TGCCATCTCACGCTTTATCGTAGCAAACCTAAGGGGCGTACAAATCAGCGTTCAACGAGGACTAATTGCCACCATCCATC
GGCAAAAACGTACTCAACATCGGCGAAAGAGCCTTGGGTGTTAGCCAGCAATTTACCACCAGAATCTCGGAGCCCAAAGC
AGCTGGTAAACCTGTACGCCAAACGTATGCAAATAGAGGAAACCTTTCGTGACCTCAAAAGCCCGGCATACGGCTTTGGC
TTACGCCAAAGTCGTACCAACAGTCCAGAGCGATTCGACATCATCCTACTGATAGCGTTGATGGTTCAATGCCTGTTGTG
GCTAGTTGGTTTACACGCACAGCAACAGGGCTGGGATAAGCATTTTCAGGCCAATACCATTGGGCATCGAACGGTACTCT
CAACGATTCGCTTGGGATTGGAGGTACTCAGGCGGCCTGATTATCAAATCACGGAGAAAGAATTGCTGGCGGCCTGGGTA
TTATTCGCCAATCAGTTGCTCAAATATGGCTATGCTATGGCTGATTTATGA

Protein sequence :
MIKWFRQKLHLDNKMREANILQHSLHQYCPELHLKRLNSLMLASKALIECKTLTLTELGRNLPTTARTKHNIKRIDRLLG
NTHLHQERLAVYQWHASLICSGNPMPIVLVDWSDIREHKRIMALRASIAFNGRSITLYEKSYPLSEQCSKASHNGFLADL
AKILPLHVTPLIVTDAGFKVPWYKEVEAHGWFWLSRIRGTVQFADIGAENWRAVRSTHDLANGQAKSLGCKTLTKTNPIN
CHLTLYRSKPKGRTNQRSTRTNCHHPSAKTYSTSAKEPWVLASNLPPESRSPKQLVNLYAKRMQIEETFRDLKSPAYGFG
LRQSRTNSPERFDIILLIALMVQCLLWLVGLHAQQQGWDKHFQANTIGHRTVLSTIRLGLEVLRRPDYQITEKELLAAWV
LFANQLLKYGYAMADL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 0.0 99
IS10 CAI43894.1 transposase for IS10 Not tested LEE Protein 1e-145 72
tnp AEA34664.1 IS10 transposase Not tested Not named Protein 4e-145 72
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 2e-144 71
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 4e-144 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_3732 YP_965091.1 transposase, IS4 family protein VFG0647 Protein 7e-145 71