|
Name : Sputw3181_3703 (Sputw3181_3703) Accession : YP_965066.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4232720 - 4234285 bp Length : 1566 bp Strand : - Note : KEGG: shm:Shewmr7_0152 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGAGTGAAATTCAATTATCCCAAGTCGATGACTTAAGCCTAGCGTCTAATGAACTAGGCTTAGATACCGAAGGTGATGA GGTCTTTCGCTCCAATAGCAAAGAGCGTTTACCCTTTGCCTTTGCCCACCGTCACGAGGTGATTTTGGCCTATGGTGATA CAGACGAATTAAGCCTGTTTCATACCGCTAAAACACCACTTGCCGCCATGCTTGAAGCACGGCGTTATTCGGGAGTTGAT TTGCCCTTAGTGCAACTTGAGGCGGGTAGATTTGAGGCCAAATTGACTCAGGTCTATCAGGCTAATTCCTCTGAGGCACA GCAACTGATGGAAGATATTGGCAACGAGATGGATTTATTCACTCTTGCTGAAGAGTTACCTCAGACCGAAGATTTGCTTG AAGGTGATGATGACGCACCTATCATCAAACTGATTAATGCCTTGTTATCCGAAGCGATTAAAGAAGAAGCCTCAGATATT CATATCGAAACCTATGAGAAGCAGTTAATCGTACGTTTTCGTGTTGATGGTGTGCTTAAAGAAGTGCTTAAACCCAACCG TAAATTGTCGTCACTGTTAGTGTCGCGGATTAAGGTGATGGCGCGCCTCGATATTGCTGAAAAGCGTGTACCACAAGATG GCCGTATCTCATTGCGTATTGCGGGACGTGCCGTTGATGTACGGGTGTCGACCATGCCATCGAGCCATGGTGAGCGTGTC GTGCTGCGTTTACTTGATAAAAATGCGGGTAATCTTGATTTAAAACAACTGGGGATGACAGACGGTATTCGCGTTAAATT TGAAGAGCTTATCCGTCGTCCACACGGTATTATCTTAGTGACGGGTCCTACTGGTTCAGGTAAAAGTACCACGCTGTACG CAGGTTTAACTGAGATTAACTCCAAAGACACCAACATTCTCACTGTTGAAGATCCTATCGAATATGAGTTAGAAGGCATA GGCCAGACCCAAGTTAACACTAAGGCAGATATGACTTTTGCCCGTGGTCTAAGGGCGATTTTACGTCAAGATCCAGACGT GGTGATGATTGGTGAGATCCGCGATCTCGAAACCGCCCAAATTGCGGTACAGGCGTCACTCACGGGTCATATGGTGATTT CAACCCTGCATACTAACACCGCCTCTGGCGCTATTACCCGTTTGCAAGATATGGGTGTCGAGCCTTTCCTCGTTTCATCG AGTTTGCTTGGTGTGTTAGCTCAGCGTTTGATCCGAACTCTGTGCCCTAAATGTAAGATTGAACATGTTCCCGATGAACG TGAACGTGAATTACTGGGCATCGCCGCAGATGATAACCGACACATCTTCCGTGCCAATGGCTGTAAGGCTTGTGGCGAAA GCGGTTATCGCGGTCGTACGGGGATCCACGAATTACTGCTGGTGGATGATAATGTGCGCGAGCTTATCCATGGTGGTCGA GGTGAGTTGGCGATTGAAAAATACATTCGCCAGTTCGTACCCAGTATTCGCCATGATGGCATGAGTAAGGTGCTCATGGG CATCACTACACTTGAAGAAGTGCTAAGGGTGACCCGCGAGGAGTAA Protein sequence : MSEIQLSQVDDLSLASNELGLDTEGDEVFRSNSKERLPFAFAHRHEVILAYGDTDELSLFHTAKTPLAAMLEARRYSGVD LPLVQLEAGRFEAKLTQVYQANSSEAQQLMEDIGNEMDLFTLAEELPQTEDLLEGDDDAPIIKLINALLSEAIKEEASDI HIETYEKQLIVRFRVDGVLKEVLKPNRKLSSLLVSRIKVMARLDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHGERV VLRLLDKNAGNLDLKQLGMTDGIRVKFEELIRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELEGI GQTQVNTKADMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHMVISTLHTNTASGAITRLQDMGVEPFLVSS SLLGVLAQRLIRTLCPKCKIEHVPDERERELLGIAADDNRHIFRANGCKACGESGYRGRTGIHELLLVDDNVRELIHGGR GELAIEKYIRQFVPSIRHDGMSKVLMGITTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-152 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-152 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputw3181_3703 | YP_965066.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-149 | 64 |
| Sputw3181_3703 | YP_965066.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-152 | 63 |
| Sputw3181_3703 | YP_965066.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-137 | 57 |
| Sputw3181_3703 | YP_965066.1 | general secretory pathway protein E | VFG2426 | Protein | 9e-77 | 46 |
| Sputw3181_3703 | YP_965066.1 | general secretory pathway protein E | VFG0112 | Protein | 1e-83 | 46 |
| Sputw3181_3703 | YP_965066.1 | general secretory pathway protein E | VFG1880 | Protein | 2e-84 | 43 |
