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Name : Sputw3181_3702 (Sputw3181_3702) Accession : YP_965065.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4231493 - 4232716 bp Length : 1224 bp Strand : - Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F DNA sequence : ATGCCAGCATTTGAATATAAAGCACTGGATGCCAAGGGTAAGCAGCTTAAAGGCGTGATAGAGGCCGATACCGCCAGACA TGCCCGTAGCCAACTGCGGGAACAGCGTATGATGCCGCTGGAAATTCTTCCCGTTACCGAAAAAGAAGCCAAAGCCAAAA GCAGTGGGTTTTCTGTTTTCAAACGTGGGATTTCAGTCGCTGAACTTGCCCTTATTACTCGCCAAATCGCGACGTTAGTG GCGGCGGGGTTACCTATTGAAGAATCCCTTAAAGCCGTCGGTCAACAATGTGAGAAGGATCGTCTCGCGAGTATGATTAT GGCGGTGCGTTCACGGGTCGTCGAAGGTTATAGCTTTGCCGACTCCCTTGCTGAGTTTCCGCATATTTTCGATGACTTAT ACCGCGCTATGGTGGCCTCGGGGGAAAAGTCAGGGCACCTAGAAGTGGTCTTAAATCGTCTTGCCGATTACACCGAGCGC CGCCAACAGCTTAAGTCAAAACTGCAACAGGCAATGATTTATCCGATAGTGCTGACTGTGGTCGCGATTGGTGTGATTTC AGTATTGCTCGCGGCTGTGGTACCTAAGGTTGTTGGTCAATTTGAACATATGGGTGCAGAGTTACCCGCTACCACTCGTT TTTTGATCTCGGCGTCTGATTTTGTCCAAAACTACGGCCTCTTTGTGGTGTTGGCGATAGTATTGTTGGCAGTCGTGTTT CAACGGATGCTTAAGTCGCCAGCATTTAGAATGAAGTACGATAGTTTTTTACTGAAAATGCCTGTGATTGGTCGTGTCAG TAAAGGCCTTAATACGGCGCGTTTTGCGCGTACCTTAAGTATTCTTTCTGCCAGTTCTGTCCCCTTGCTTGATGGTATGC GTATTGCGAGCGAAGTACTGCAAAATATGCGAGTACGTGCCGCGGTTGATGATGCAACAGCACGTGTGCGAGAGGGAACC AGCCTTGGTGCTGCGTTGACTAACACTAAGCTGTTTCCGGCAATGATGTTATATATGATTGCCTCGGGCGAGAAAAGTGG TCAGCTCGAACAGATGCTAGAACGGGCTGCGGATAACCAAGATAGGGAGTTTGAAGGTAACGTCAATATTGCCCTTGGCG TATTTGAACCTATGTTGGTGGTGAGTATGGCGGGTATTGTGCTCTTTATCGTTATGGCGATTTTGCAGCCGATATTAGCA TTGAACAACTTGATTAGTAGCTGA Protein sequence : MPAFEYKALDAKGKQLKGVIEADTARHARSQLREQRMMPLEILPVTEKEAKAKSSGFSVFKRGISVAELALITRQIATLV AAGLPIEESLKAVGQQCEKDRLASMIMAVRSRVVEGYSFADSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTER RQQLKSKLQQAMIYPIVLTVVAIGVISVLLAAVVPKVVGQFEHMGAELPATTRFLISASDFVQNYGLFVVLAIVLLAVVF QRMLKSPAFRMKYDSFLLKMPVIGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEVLQNMRVRAAVDDATARVREGT SLGAALTNTKLFPAMMLYMIASGEKSGQLEQMLERAADNQDREFEGNVNIALGVFEPMLVVSMAGIVLFIVMAILQPILA LNNLISS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-99 | 56 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-98 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputw3181_3702 | YP_965065.1 | general secretion pathway protein F | VFG2049 | Protein | 4e-97 | 56 |
| Sputw3181_3702 | YP_965065.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-91 | 48 |
| Sputw3181_3702 | YP_965065.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-80 | 44 |
