Gene Information

Name : Sputw3181_3701 (Sputw3181_3701)
Accession : YP_965064.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4230995 - 4231429 bp
Length : 435 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: shm:Shewmr7_0154 general secretion pathway protein G

DNA sequence :
ATGCAAATAAACAACAGACAAAAAGGTTTTACCTTACTCGAAGTGATGGTAGTGATTGTTATTCTTGGTATTCTGGCCTC
TATGGTCGTGCCTAATTTAATGGGTAACAAAGATAAAGCCGACCAACAAAAAGCCGTATCAGACATAGTGGCGCTCGAGA
ATGCGCTAGACATGTATAAGCTAGATAATGGCGTTTATCCAACGACTGAACAGGGTTTAGAAGCCTTAGTGCAAAAGCCA
ACCATTTCACCAGAGCCGCGCAATTATCGTGAAGAAGGCTATGTCAAACGCTTACCACAGGATCCATGGCGTAATAATTA
CTTACTGTTAAGCCCAGGCGAAAACAGCAAGCTCGATATTTTCAGCGCAGGCCCAGATGGTCAACCAGGTACCGAAGATG
ATATCGGTAACTGGAATTTACAGAATTTCCAATAA

Protein sequence :
MQINNRQKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGVYPTTEQGLEALVQKP
TISPEPRNYREEGYVKRLPQDPWRNNYLLLSPGENSKLDIFSAGPDGQPGTEDDIGNWNLQNFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-44 68
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-44 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_3701 YP_965064.1 general secretion pathway protein G VFG2050 Protein 4e-45 68
Sputw3181_3701 YP_965064.1 general secretion pathway protein G VFG1871 Protein 1e-35 58
Sputw3181_3701 YP_965064.1 general secretion pathway protein G VFG0180 Protein 9e-33 55