Gene Information

Name : Sputw3181_3512 (Sputw3181_3512)
Accession : YP_964878.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : molydopterin dinucleotide-binding region
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 4003537 - 4006644 bp
Length : 3108 bp
Strand : +
Note : PFAM: molydopterin dinucleotide-binding region; KEGG: she:Shewmr4_0633 molydopterin dinucleotide-binding region

DNA sequence :
ATGGATAAGAGTAAACGTCGTTTTATCAAAGGGGCCGCTGTAACGGGTGGTGTGGGATTGTTTGCCGCGGGTTATAGCCA
TACATTAGCGCAAATAGGTAAAGGTGTCGTCAATGGCACTTCAGGAAAACCGACCCAAGATCCACTGCATGGCAATTCCT
TAGCACCTGAATACAAAGTCGATTTACAGTCAGGCCAGTTAATCAGCAATGACGATCAACGCATCGCCAATACTATGTGC
TTAGGTTGCTGGACCAAATGCGGCGTGCGCGCTCGTATCGATCAAAAAACCGATAAAATCATCCGTATCAGCGGTAATCC
TTATCATCCGTTGTCATCGCGGGAACATATCGATTTTGATACGCCGATCAAAACCGCCTTTGTTGGGCTTAGCGCCTTTC
AAGAACAGGGTCTGCAGGGACGTTCCACCGCCTGCGCCCGCGGTAATGCCATGCTAGAACAATTAGATAGCCCACATCGT
GTCACCCAATGCCTTAAACGCGTGGGTAAGCGCGGCAGCGGCCAATGGCAGAGCATTAGCTTTGAGCAATTGCTGAATGA
AGTCGTCGAAGGTGGTGATTTATTTGGTGAGGGCCAAGTCGAAGGCTTAAGAGCAATTCGTGATATCACCACGCCGCTCG
ATACCAATAATCCAGAATACGGCCCTAAGGCTAACCAGTTACTGGTCTCAAACGCCTCCGATGAAGGCCGCGATGCCATT
ATCAAACGTTTTACCTTCAACAGCTTTGGCACCCGAAACTTTGCCAACCACGGCGCTTACTGTGGATTTACCTACCGCGC
CGGAGCAGGCGCTTTATTGGATGATTTGAAAAAATACGCCCACTTGAAACCCGATTGGGACCATAGCGAATTTTTACTCT
TTATCGGCACTTCACCGCAGCAATCGGGCAATCCCTTTAAACGCCAAGCAAGACAATTGGCTAACGCGCGGGTGAATAAA
ACAAATTTCAGTTATGTGGTGGTGTCGCCCATGCTACCCAATACCTCGAATCAACCTTGTGCGGGTAACAATACTTGGCT
GCCGATCCGCCCCGCCACCGACTCGGCCCTCGCCATGGGCATGTTGCGCTGGATTATTGATAACCAGCGCTACGCCGCCG
ATTTTTTGAGTGCGCCCAATGTCGATGCTGCTAAGGTTTCGGGTTACCGTGGCTTCAGCAATGCGGGCTTCTTGATCGTC
AGCGAACCTACCCATCCAAGATATGGCCAATATCTCTTTGCCAGCGATCTTGGCTTACCCTTCGACGGCAAAGCCTACGG
CGAGCAAGACTCGCAGTTGGTTGTCGATGCCGCGAGTGGCAAGATAGTTTTGGCGAGCCAAAGTCAGAAAGCCAAGCTCG
ACGTTGACCAAAACGTCGACACACCTAAGGGGGTGATTGCGGTTAAATCTAGCTTCCAACTGTTAAGTGAAGCGGCGCAG
AGCTTCGAGATGGCACACTATGCCAAGGAGTGCGATATTAGCGAGGCGCAAATTATCGCCCTCGCGGATAAATTTACCAG
CCATGGCACTAAGGCTGCGGTGATCTCCCACGGCGGCACGATGAGCGCCAATGGTTTCTATAGCGCGTGGGCGATCATGA
TGCTCAACGCCATGATAGGTAACATCAATCTCAAGGGCGGCGCATTAGCCTCCGGCGGTTCATTCCCGGCCTTTGGTAAA
GGCCCAAGGTATAATCTGCAGGAGTTTGACGGCATGGTCGAGCCTAAGGGCGTATTCCTATCGCGATCTAAATTCCCCTA
CGAGAAAACCTCAGAGTATCGCCGTAAAGTCGAAGCGGGCGAATCGCCTTATCCTGCAAAGGAGCCTTGGTTTCCGATTT
CATCACCCTTGCTTGGCGAACATTTAACGGCGGCGGTGCACGGCTATCCCTATCGACTCAAAGCATGGATTAACCACATG
GGCAATCCGATTTATGGTCAAGCGGGCCTAGGTGAAGCCATTGGTGAACAACTGAAAGATCCCAAAGTACTGCCACTGTT
TATCAGTATCGACAGCTTTATTAACGAAACCTCGGCGCTATCGGATTATATCGTGCCCGACACATTAACTTACGAGTCAT
GGGGTTGGAGCCCTTCGTGGCATGGGACTCTGACGAAGGAAACGACAGGTCGCTGGCCGATTGTCGAACCAAGGGTCACA
AAAATGGCCAGTGGCGATGTGGTGTGCATGGAGTCTTTCTTAAGCCAAGTGGCAATAAAACTGCAATTACCTGGTTTTGG
CGAAAATGCCGTTAAGGCCGCCGATGGCAGCTTACATCCGTTAACGCGCGCAGCGGATTACTCACTCTACGGTGCCGCCA
ACGTGGCCTATTTGGGTAAAGCCGTTGCCGATATTAACGCTGAGGACATGTACCTTAGCGGTGTGAGTCGTATTCAAAGT
GAGCTCAACGCCAGACTCAAGCCAGATGAAGTCAAAAAAGTCAGCTACTTATTTGCCCGCGGCGGCCGCTTTGAGAATAT
GAGCGGTGCACGGGATGAAGTGGGGAATCCAACCAAGGTTTGGCCAAAACCTATGATGCTGTGGAATCCCGAAGTGGGCA
GTCGGCGTAACAGTCTCACTGGGGAATTTATGAGTGGCTGTCCGCGCTTATATCAACCCGCCTTAGCCGATGGCACACCG
CTCGATAAGGCGTTTAATAAATCACAGTGGCCTTTGCTGATCAGTAGTTACAAATCCCACACCATGAGCTCTATGAGTAT
TGGCTCGGATCGTTTGCGCCAAGTGCACCCTAATAATCCGGTGCGGCTGAACGAGAAGACCGCCAGTCGCCTTGGAATAA
GCACTGGTGACACAGTAAAAATCAGCACGCCCAACGGCAGCGTGATTGCCTTAGTGGAATGTGTTGCCGGAGTGCACCCT
GACTGCATCGCCATCGAACACGGTTATGGCCATAAGGAACTCGGCGCGCGGGACGTAGTGATCGACAACCTTAAAATCGC
CGCCAATCCGCTGATCCGAGTCGGCATCAATATGAACGACTTGAATCTGTTTGATCCGAGTCGCCACGGCCGCTACCCGC
TGGTAGATTGGGCAAGTGGCGCTTCGGCCAGACAAGGGCTGCCCGCAAAAATAGAGAAAGTCGTATAA

Protein sequence :
MDKSKRRFIKGAAVTGGVGLFAAGYSHTLAQIGKGVVNGTSGKPTQDPLHGNSLAPEYKVDLQSGQLISNDDQRIANTMC
LGCWTKCGVRARIDQKTDKIIRISGNPYHPLSSREHIDFDTPIKTAFVGLSAFQEQGLQGRSTACARGNAMLEQLDSPHR
VTQCLKRVGKRGSGQWQSISFEQLLNEVVEGGDLFGEGQVEGLRAIRDITTPLDTNNPEYGPKANQLLVSNASDEGRDAI
IKRFTFNSFGTRNFANHGAYCGFTYRAGAGALLDDLKKYAHLKPDWDHSEFLLFIGTSPQQSGNPFKRQARQLANARVNK
TNFSYVVVSPMLPNTSNQPCAGNNTWLPIRPATDSALAMGMLRWIIDNQRYAADFLSAPNVDAAKVSGYRGFSNAGFLIV
SEPTHPRYGQYLFASDLGLPFDGKAYGEQDSQLVVDAASGKIVLASQSQKAKLDVDQNVDTPKGVIAVKSSFQLLSEAAQ
SFEMAHYAKECDISEAQIIALADKFTSHGTKAAVISHGGTMSANGFYSAWAIMMLNAMIGNINLKGGALASGGSFPAFGK
GPRYNLQEFDGMVEPKGVFLSRSKFPYEKTSEYRRKVEAGESPYPAKEPWFPISSPLLGEHLTAAVHGYPYRLKAWINHM
GNPIYGQAGLGEAIGEQLKDPKVLPLFISIDSFINETSALSDYIVPDTLTYESWGWSPSWHGTLTKETTGRWPIVEPRVT
KMASGDVVCMESFLSQVAIKLQLPGFGENAVKAADGSLHPLTRAADYSLYGAANVAYLGKAVADINAEDMYLSGVSRIQS
ELNARLKPDEVKKVSYLFARGGRFENMSGARDEVGNPTKVWPKPMMLWNPEVGSRRNSLTGEFMSGCPRLYQPALADGTP
LDKAFNKSQWPLLISSYKSHTMSSMSIGSDRLRQVHPNNPVRLNEKTASRLGISTGDTVKISTPNGSVIALVECVAGVHP
DCIAIEHGYGHKELGARDVVIDNLKIAANPLIRVGINMNDLNLFDPSRHGRYPLVDWASGASARQGLPAKIEKVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 51
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 51
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_3512 YP_964878.1 molydopterin dinucleotide-binding region VFG0484 Protein 0.0 51