Gene Information

Name : Sputw3181_3510 (Sputw3181_3510)
Accession : YP_964876.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 4001647 - 4002429 bp
Length : 783 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: she:Shewmr4_0635 4Fe-4S ferredoxin, iron-sulfur binding domain protein

DNA sequence : 
ATGGACAAGAGTAAACGTCAGTTTCTCGGCAAAATGGCCAGCGTCAGTGTTGGCGCCGCACTCATCCCTGTCGTGCAAGT
GTATGCACAGGATGATAAGCGCAGCCCTCAAATGCACAGTGCCAGCGAAGGCCAAGTGGGTAAACGTTACGGTATGGTGA
TCGATCTACGCCGCTGTGTGGGCTGCCAAGCCTGTACCGTCGCTTGCACTATCGAGAATCAACCGCCCCTCGGCCAATTT
CGCACCACAGTGCAGCAGTATGAAGTCTCGCAGCAGGAAGATACTACTCCTCCTGCGTTTTTAATGCTGCCAAGACTTTG
TAATCACTGTGAAAACCCGCCCTGCATCCCCGTTTGTCCTACGGGCGCGACCTTCCAGCGCAAGGACGGCATAGTGGTCG
TCAACAATGAATGGTGTGTTGGTTGTGGCTATTGCGTGCAAGCCTGCCCCTATGATGCGCGCTTTATCAACCACGATACC
AATACCGCCGACAAATGTACCTTCTGCGCCCATAGGTTAGATGCAGGGTTACTGCCCGCCTGTGTCGAAACCTGCGTAGG
AGAAGCCCGTGTGATTGGCGATCTGAATAATCCCAACAGCCAGATAAGCCAACTGCTCGCCGCCAACAAAACCGATATCA
AGGTGCTAAAACCAACAGCAAACACTGCGCCGCGGGTATTCTACATCGGCATGAGCAGCGCTTTTGAGGACAAGATCAGC
GGCCAAGCCCCCGTTAGAACCTTACTTACCGATACTGGCGAGGAGATCCACCATGGTCATTAA

Protein sequence : 
MDKSKRQFLGKMASVSVGAALIPVVQVYAQDDKRSPQMHSASEGQVGKRYGMVIDLRRCVGCQACTVACTIENQPPLGQF
RTTVQQYEVSQQEDTTPPAFLMLPRLCNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDT
NTADKCTFCAHRLDAGLLPACVETCVGEARVIGDLNNPNSQISQLLAANKTDIKVLKPTANTAPRVFYIGMSSAFEDKIS
GQAPVRTLLTDTGEEIHHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 6e-74 60
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 6e-74 60
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 8e-74 60
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-73 60
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-73 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_3510 YP_964876.1 4Fe-4S ferredoxin VFG0486 Protein 5e-74 60