|
Name : Sputw3181_3474 (Sputw3181_3474) Accession : YP_964840.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Resistance Product : acriflavin resistance protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 3954384 - 3957467 bp Length : 3084 bp Strand : + Note : PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_0550 acriflavin resistance protein DNA sequence : ATGAATATTGCTGAATACTCCATTCGCCACAAAGTCATTAGCTGGATGTTTGTGTTACTCCTATTAATTGGTGGTGGCAT CAGCTTTACGGGATTAGGGCAGTTAGAATTTCCCGAATTTACCATCAAAGAAGCCCTAGTGATCACGGCTTATCCCGGTG CCTCGCCAGAACAAGTTGAAGAAGAAGTTACCCTACCGCTGGAAGATGCCCTACAACAACTCGATGCAGTCAAGCATGTG ACCTCTATTAACAGTGCGGGTTTGTCACAAATCCAAATTGAGATCAAAGACAGTTACGATAAAACTAGCCTGCCACAGGT ATGGGATGAAGTGCGCCGTAAAGTCAATGATACTGCGGGCCAATTACCTCCAGGCACAGGGACCCCACAAGTCATGGATG ACTTTGGTGATGTATACGGGATTTTATTTAATCTTTCAGGGCCAGATTACAGCAACCGAGAACTGAGCAATTATGCCGAC TATTTACGCCGTGAGTTAGTACTCGTGCCAGGGGTAAAAAAAGTTTCAGTTGTGGGCAGTATTACCGAGCAAGTGGTCAT TGAAATATCTCAGCAAAAACTCTCGGCGCTAGGGTTAGATCAAAGCTATATCTATGGCCTTATCAATAATCAAAACGTGG TCTCCAATGCAGGAAGCCTAGTGATTGGTGATAATCGAATCCGCATTCATCCCACTGGTGAATTTGGCAGTATTCAGGAT CTCGCCCGCTTGATTGTCAGTCCACCCGGCAGCACGGAACTTATCTATTTAGGCGATATTGCCAATATCGCAAAGGATTA TAACGAAACCCCGACAGTGCTTTACCACAACAAAGGCGAAGCTGCGCTATCCCTAGGCATTTCCTTCTCTAGCGGTGTAA ACGTCGTCGAAGTCGGTCAAAGGGTGAGTGAACGCCTCACCGAACTCGAATCCCAACGTCCGATTGGAATGAATTTAGAT ACAGTCTACAACCAAAGTTCGGCGGTAGATGACACCGTTAATGGCTTTTTAATCAATCTATTAGAGTCAATTGCCATCGT TATTGCCGTACTATTGCTGTTTATGGGCTTACGCTCAGGCTTATTAATGGGGCTTATCCTGCTGTTAACCATCTTAGGGA CTTTCATCGTAATGAAAGTGCTAGGTATTGAGCTACAGCTCATTTCACTCGGTGCGTTGATTATCGCCTTAGGTATGTTG GTCGATAACGCAATTGTCGTCACCGAAGGCATTTTAATTGGCCTTCGCCGTGGCAAGACGCGCTTAGAAGCGGCAAAACA AATTGTCTCCCAGACTCAATGGCCACTGTTAGGTGCAACCATTATTGCCATCATCGCCTTTGCGCCTATCGGATTATCGC AAAATGCCTCTGGAGAATTTTGTCGCTCACTGTTCCAAGTGCTGATGATTTCATTATTTATCAGTTGGATCACCGCAATT ACCCTCACCCCTTTCTTCTGTCATTTGTTGTTTAAAGATGCACCAAGTGATGACGAGCAAGATCCTTATAAGGGTTGGGT TTTCAACTTATATCGAGCCAGTTTAACCCTAGCGCTGCGATTTAGAATTGTGAGCATACTGCTGGTTGGTGTGCTGTTAG TGAGTGCAGTGATTGGCTTTGGTCATATTAAAAATGTGTTTTTTCCCGCATCCAATACGCCAATCTTTTTTGTGGATATT TGGATGCCTGAAGGCACTGATATTAAAGCAACGGAGCGCTTTGCTGCTGATATTGAACAACAATTACTCAAACAAGCTGA GCAACAGCATACTGGCCTGACCCACCTAACGACGGTAATAGGCCAAGGGGCGCAGCGTTTTATTCTGCCTTATCAGCCCG AAAAAGGTTACCCCGCATTCGCCCAGTTGATTGTAGAAATGCAGGATCTTGAGGCGGTGAAAAACTATATGCCTGAACTG GAGCGTTTTTTAAATCAACGCTTCCCACAGGCACAATATCGCCTAAAAAATATGGAAAATGGTCCATCCCCCGCAGCCAA AATTGAGGCTCGTTTCTATGGTGATGATCCTGAAGTCCTAAGAGCATTAGGTGCCCAAGTCGAAGCCATTTTCTACGCGG AGCCAAGCATGGATGGTATACGCCACGACTGGCGTAACCAAGTCCCGTTAGTTCGTCCGCAATTGGAAAATGCCCAAGCA CGGGAAACGGGGATCAGTAAACAAGATCTCGACAATGCACTGCTGGTTAACTTTAGCGGTAAACAAATTGGTTTATATCG AGAAACCAGCCACTTGTTGCCGATAGTCGCAAGAGCACCCGCCGAGGAGCGCTTGCAAGCTGATAGTCTCTGGAAACTAC AAATTTGGAGTAGTGAACACAGCACCTTTGTACCAGCAACTCAAGTTGTCAGTAACTTCAATACCGAATGGGAAAATCCA CTGGTGATGCGCCGTGACCGTATGCGCATGCTTGCTGTCTTGGCAGATCCTAAATTAGGCAGCGATGAAACGGCGGACTC TGTGCTACGTAAGGTCAAAGATAAGGTTGAAGCTATCGCCTTACCCGCTGGCTACCACCTCGAATGGGGCGGCGAATATG AAACCGCAGGTGAAGCGCAAACAGCGGTGTTTAGCTCAATTCCGCTGGGTTACCTTGCCATGTTTTTAATTACAGTATTC CTATTCAACTCTGTGCGTCAGCCATTGGTTATTTGGTTTACTGTACCACTCGCATTGATTGGGGTTTCGGCGGGACTCTT GTTGTTCGATGCGCCCTTCAGCTTTATGGCACTGCTTGGCCTATTGAGCTTATCGGGCATGGTGATCAAAAACGGCATTG TGTTGGTCGATCAAATCAACCTTGAACTAAGTGAAGGTAAAGCGGCCTATAGTGCATTGTTGGATTCCTGCGTCAGCCGT GTTCGCCCTGTCATGATGGCGGCGATAACCACAATGCTTGGAATGATCCCCTTAATTTCAGATGCATTTTTTGGTTCGAT GGCCATAACCATTATCTTTGGCTTAGGCTTCGCTTCTGTGCTGACATTAATTGTCCTGCCAGTCATGTATAGCTTGGCCT TTAATATCAAACCGACACTAATAGGAGGTCAATCACGTAACTAA Protein sequence : MNIAEYSIRHKVISWMFVLLLLIGGGISFTGLGQLEFPEFTIKEALVITAYPGASPEQVEEEVTLPLEDALQQLDAVKHV TSINSAGLSQIQIEIKDSYDKTSLPQVWDEVRRKVNDTAGQLPPGTGTPQVMDDFGDVYGILFNLSGPDYSNRELSNYAD YLRRELVLVPGVKKVSVVGSITEQVVIEISQQKLSALGLDQSYIYGLINNQNVVSNAGSLVIGDNRIRIHPTGEFGSIQD LARLIVSPPGSTELIYLGDIANIAKDYNETPTVLYHNKGEAALSLGISFSSGVNVVEVGQRVSERLTELESQRPIGMNLD TVYNQSSAVDDTVNGFLINLLESIAIVIAVLLLFMGLRSGLLMGLILLLTILGTFIVMKVLGIELQLISLGALIIALGML VDNAIVVTEGILIGLRRGKTRLEAAKQIVSQTQWPLLGATIIAIIAFAPIGLSQNASGEFCRSLFQVLMISLFISWITAI TLTPFFCHLLFKDAPSDDEQDPYKGWVFNLYRASLTLALRFRIVSILLVGVLLVSAVIGFGHIKNVFFPASNTPIFFVDI WMPEGTDIKATERFAADIEQQLLKQAEQQHTGLTHLTTVIGQGAQRFILPYQPEKGYPAFAQLIVEMQDLEAVKNYMPEL ERFLNQRFPQAQYRLKNMENGPSPAAKIEARFYGDDPEVLRALGAQVEAIFYAEPSMDGIRHDWRNQVPLVRPQLENAQA RETGISKQDLDNALLVNFSGKQIGLYRETSHLLPIVARAPAEERLQADSLWKLQIWSSEHSTFVPATQVVSNFNTEWENP LVMRRDRMRMLAVLADPKLGSDETADSVLRKVKDKVEAIALPAGYHLEWGGEYETAGEAQTAVFSSIPLGYLAMFLITVF LFNSVRQPLVIWFTVPLALIGVSAGLLLFDAPFSFMALLGLLSLSGMVIKNGIVLVDQINLELSEGKAAYSALLDSCVSR VRPVMMAAITTMLGMIPLISDAFFGSMAITIIFGLGFASVLTLIVLPVMYSLAFNIKPTLIGGQSRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 4e-172 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputw3181_3474 | YP_964840.1 | acriflavin resistance protein | BAC0519 | Protein | 0.0 | 55 |
| Sputw3181_3474 | YP_964840.1 | acriflavin resistance protein | BAC0428 | Protein | 0.0 | 54 |
| Sputw3181_3474 | YP_964840.1 | acriflavin resistance protein | BAC0526 | Protein | 0.0 | 53 |
| Sputw3181_3474 | YP_964840.1 | acriflavin resistance protein | BAC0425 | Protein | 2e-172 | 42 |
