Gene Information

Name : Sputw3181_0310 (Sputw3181_0310)
Accession : YP_961715.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : XRE family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 337047 - 337493 bp
Length : 447 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; KEGG: vvu:VV10402 predicted transcriptional regulator

DNA sequence :
ATGAGTGATAAACAAACGACTACTGAAACGGCTAAAGATACCATCGCCCGTCTTAGAGCTAATCGTCAGCAACGGAGTGA
TATTGCGATTGAGGCGTCACAGCATCGGCAACCCGTAAATATTGGAGATGCTCCAATAAAGCCAACCCCTAAACGCGCCT
CTAAGCAATCAGGCGGTGTTAATACGGTAGAACGCAAGAATGCGATTAACGCTATCACACAACGGCTCTTACGCAGTGAG
CTAAGCCAAGGGCAAGCTCTGAAAGCTCTGCGAGTTGAGGTGCTAGGACTCACGCAAGATGAGTATGCAAACTTGGTTAA
AGTATCGCGCAAGACCCTCTCGGACGTTGAGAACGACCGTGGTAGTTTTAAGACCGATATTCTCGACCGACTATTTAAGC
CTTTTGGTCTTAAGGTCGGGATTGTGCCTATCTCTGTTGGGCCTTAG

Protein sequence :
MSDKQTTTETAKDTIARLRANRQQRSDIAIEASQHRQPVNIGDAPIKPTPKRASKQSGGVNTVERKNAINAITQRLLRSE
LSQGQALKALRVEVLGLTQDEYANLVKVSRKTLSDVENDRGSFKTDILDRLFKPFGLKVGIVPISVGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0339 YP_001216295.1 transcriptional regulator Not tested VPI-1 Protein 7e-31 50