Gene Information

Name : Sputw3181_3079 (Sputw3181_3079)
Accession : YP_964450.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3514297 - 3515793 bp
Length : 1497 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: she:Shewmr4_2926 aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGAGCACACCGAAGAGCCGCAGCGAATGGGAAAGTCTGGCTGCCAGTCTATCTATTAATGGTAAGGCGTTTATCAATGG
CGAATACCAAGATGCCGTTTCGGGTAACACCTTCGATTGTATTAGTCCTATCGATGGCCGCTTGTTGGTAAAAGTGGCTA
GTTGCGATCTTGCAGATGCTAATCTTGCGGTTGCTAATGGTCGCAGCGTATTTGAGTCTGGTGTTTGGTCGCAGCAGTCT
CCGGTAAAGCGCAAACAAGTGATGATACGTTTCGCCGAGTTACTGGAGGAAAATGCCAATGAACTCGCACTGTTAGAAAC
CCTCGACATGGGTAAACCGATTCGTTTCTCTAAAGCGGTGGATGTGGCGGGTGCTGCCCGTGCGATTCGCTGGTCTGGCG
AAGCGATTGATAAAATTTACGATGAACTTGCGCCAACGGCTCACAACGAAATTGGCATGATCACCCGTGAACCAGTCGGG
GTTGTGGCCGCGATTGTGCCGTGGAACTTCCCTATGCTGATGGCGTGTTGGAAGCTCGGGCCAGCGCTTGCCACGGGTAA
CAGTGTAGTATTAAAACCCTCTGAAAAGTCACCCTTAACGGCTATCCGTATGGCGCAATTGGCTATTGAAGCTGGGATCC
CACAAGGCGTACTCAACGTGTTGCCAGGATTTGGTCATACTGTGGGTAAAGCCTTAGCGTTGCATATGGATGTGGATACG
TTGGTGTTCACAGGTTCCACCAAAATTGCAAAACAATTAATGATTTATGCAGGTGAATCGAACATGAAACGCGTGTGGTT
AGAGGCCGGAGGCAAGAGCCCCAATATCGTCTTTAATGACGCGCCAGATCTGAAAGCTGCTGCTGTTGCTGCGGCCGAAG
CCATTGCCTTTAACCAAGGTGAAGTTTGCACCGCAGGTTCGCGTTTGCTGGTGGAATCCGGGGTGAAAGATGAGCTTATC
GCGCTTATTGCTGAGGAGTTAGCCTCATGGCATCCGGGGCATCCACTCGATCCCGCCACTGTGAGCGGCGCCGTTGTCGA
TAAACAACAGTTAGACACAGTACTCAGCTACATCAAAGCGGGTAAAGACGAAGGTGCAACCTTAGTCCACGGTGGCAGCC
AAGTTATGGCTGACACGGGCGGTGTATATGTGCAGCCAACAGTATTTTCGAATGTAAACAACCAGATGAAAATTGCCAGC
GAAGAGATATTCGGCCCTGTGTTATCTGTCATTGAATTTAATGGCATGGAAGAGGCGATATCAATAGCCAACGATACCAT
CTACGGCTTAGCCGCTGGGGTGTGGACTTCGGATATCAGCAAGGCCCATAAAACCGCCAAAGCCCTACGCTCAGGCATGG
TGTGGATCAACCATTACGATGGCGGCGACATGACAGCGCCGTTCGGAGGCTATAAACAGTCAGGTAATGGCCGAGATAAA
TCTCTGCACTCCTTCGACAAATACACAGAACTGAAAGCGACTTGGATCGTGCTATAA

Protein sequence :
MSTPKSRSEWESLAASLSINGKAFINGEYQDAVSGNTFDCISPIDGRLLVKVASCDLADANLAVANGRSVFESGVWSQQS
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDVAGAARAIRWSGEAIDKIYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPMLMACWKLGPALATGNSVVLKPSEKSPLTAIRMAQLAIEAGIPQGVLNVLPGFGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESGVKDELI
ALIAEELASWHPGHPLDPATVSGAVVDKQQLDTVLSYIKAGKDEGATLVHGGSQVMADTGGVYVQPTVFSNVNNQMKIAS
EEIFGPVLSVIEFNGMEEAISIANDTIYGLAAGVWTSDISKAHKTAKALRSGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SLHSFDKYTELKATWIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-122 57
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-72 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-72 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-72 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_3079 YP_964450.1 aldehyde dehydrogenase VFG0082 Protein 2e-72 42