Gene Information

Name : Sputw3181_0251 (Sputw3181_0251)
Accession : YP_961656.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 274267 - 274944 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4428 DNA-binding response regulator

DNA sequence : 
ATGAAAATACTTTTAGTTGAAGATGATGCGACGACGATTGATTACATCGTCAAAGGATTTCTTGAGCAGGGGCACAATAT
CGAAACGGCGAATGATGGCCACCAAGGTTTATCTCTCGCCACAAGCTGTCAATATGATCTGGTGATCCTCGACCGAATGT
TACCCCAGCTTGATGGCTTAAAATTACTAGCGGCTTTAAGGGCTACGGGTAATCAAACCCCTGTGCTGATTTTGTCGGCT
TTAGCCCATGTTGATGAACGGGTTAAAGGTTTGCGGGCGGGCGGTGATGACTATATGACTAAGCCGTTTGCTTTTTCTGA
ACTGTTAGTACGCGCTGAAAAACTGATGCAACGTGGTCAATCCACGCCCATTTCGACCGACTTAGTGGTTGGTGGGCTCA
AGATGGAATTACTGACCCGCAATGTGACCTTGGACGGACAGGAGTTAATGTTGCAACCTAAAGAGTTTCAGTTGCTTAAG
TATTTGATGGAACATGCTAATCAGGTCATCAGCCGCACACTATTATTTGAAGCTGTGTGGGATTATCACTTTGACCCTCG
CACCAATGTAATTGATGTACATATTGCAAAATTACGGCGTAAATTTGAGGAGTTAGGTCACGGAGAGCTTATTGAAACCG
TAAGGGGAGCGGGTTATCGCTTACGCCAAAGGCATTAA

Protein sequence : 
MKILLVEDDATTIDYIVKGFLEQGHNIETANDGHQGLSLATSCQYDLVILDRMLPQLDGLKLLAALRATGNQTPVLILSA
LAHVDERVKGLRAGGDDYMTKPFAFSELLVRAEKLMQRGQSTPISTDLVVGGLKMELLTRNVTLDGQELMLQPKEFQLLK
YLMEHANQVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEELGHGELIETVRGAGYRLRQRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-41 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0347 Protein 5e-45 44
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0083 Protein 2e-41 44
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0197 Protein 1e-39 43
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0111 Protein 3e-47 43
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0638 Protein 2e-38 43
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0308 Protein 1e-42 42
Sputw3181_0251 YP_961656.1 two component transcriptional regulator BAC0125 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_0251 YP_961656.1 two component transcriptional regulator VFG0596 Protein 4e-42 45
Sputw3181_0251 YP_961656.1 two component transcriptional regulator VFG1389 Protein 7e-36 45