|
Name : Sputw3181_2424 (Sputw3181_2424) Accession : YP_963802.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter NhaC Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 2796627 - 2797946 bp Length : 1320 bp Strand : + Note : PFAM: Gluconate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO2757 membrane protein, putative DNA sequence : ATGAATGCAGTCGTAATTGCAGTGTGTTTAATGTTGGCACTCAGTTTGTTTAGAGTGAATGTGGTGATCGCTCTGACCGT TAGCGCCCTTGTTGCAGGGTTGATTGGCGGTATGGATCTTCATCAAACCATAGACGCCTTTAATACCGGTTTAGGTGGCG GCGCACAAATTGCGCTCAGTTATGCATTATTAGGTGCCTTTGCCGTCGCACTATCGCACTCAGGATTAACGGCACTTATC TCTAAATCTATTATCAGCAGTTTAGGCAAAGAGCCTAATGCCACAAACACTCATTGGGTCCGTTGGTTACTGCTATTGTC GCTGCTTGCTATGTCGATGGCCTCACAAAATATTTTGCCAATCCACATTGCTTTTATTCCAATCCTCGTACCGCCACTAT TACATGTGATGTCCAAACTGAACATTGACCGTCGTCTAGTCGCTTGTGTGCTTACGTTTGGGCTTGTCACCACCTATATG ATTTTGCCAATTGGTTTTGGGGGAATTTTTTTAAATGATATTTTGCTATCAAACCTTACCAGTAATGGCTTAGTCGCCGT GCGGGATCAAATTCCTCCTGCCATGTTAATCCCTGCTGCGGGTATGGTAGTAGGCTTACTGACGGCTGTATTTATCAGTT ACCGTAAACCTCGGATATATGAAGATGCTAAAGCGGTCATGGCGGCACCAGAAGAAAGCCTTAATAAACGTAATATCGTT ATCGCTGCGTTAGCAATTCTTGCGACGTTGTTTGTACAACTTGAAACCGACTCAATGATCTTCGGTGCCTTAGTCGGTTT TATGATTTTCAGTTTTTCAGGTGCATTAAAACACGTTGCCGACCAAGATATCTTCAATCAAGGCGTGCGCATGATGGCCA ACATCGGCTTTATTATGATTTCTGCCGCAGGCTTTGCTGCCGTAGTAAAAGAAACGGGAGAAGTCGGTACACTTGTTGCG TCACTTGGCGAGATGATTGGTGACAATAAAGCCCTTGCTGCTTTTTTGATGCTCGTTGTCGGTTTGCTGATCACGATGGG AATAGGTTCATCCTTCTCGACTATTCCTATTATTGCGACTATTTACGTGCCTCTCGCATTAAGTTTTGGTTTTTCTGTAG CGGCAACGATTGCATTAGTTGGTACAGCGGCAGCATTAGGTGATGCGGGATCGCCTGCGTCAGATTCCACCTTGGGCCCC ACAGCAGGTTTAAATGCCGACGGCCAACACGATCATATACGTGATAGCGTAATCCCAACCTTTATTCACTACAATATTCC GTTGTTAGTGTTTGGTTGGATTGCCGCTATGGTGCTATAG Protein sequence : MNAVVIAVCLMLALSLFRVNVVIALTVSALVAGLIGGMDLHQTIDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTALI SKSIISSLGKEPNATNTHWVRWLLLLSLLAMSMASQNILPIHIAFIPILVPPLLHVMSKLNIDRRLVACVLTFGLVTTYM ILPIGFGGIFLNDILLSNLTSNGLVAVRDQIPPAMLIPAAGMVVGLLTAVFISYRKPRIYEDAKAVMAAPEESLNKRNIV IAALAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFNQGVRMMANIGFIMISAAGFAAVVKETGEVGTLVA SLGEMIGDNKALAAFLMLVVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVAATIALVGTAAALGDAGSPASDSTLGP TAGLNADGQHDHIRDSVIPTFIHYNIPLLVFGWIAAMVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 6e-98 | 58 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 6e-98 | 58 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 7e-98 | 57 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 7e-98 | 57 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 4e-101 | 57 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 4e-101 | 57 |
