Gene Information

Name : Sputw3181_2200 (Sputw3181_2200)
Accession : YP_963581.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2542363 - 2542917 bp
Length : 555 bp
Strand : -
Note : PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: gsu:GSU1711 integrative genetic element Gsu5, resolvase

DNA sequence :
ATGGCAGAAATCGGATATGCCCGAGTCTCGACCACGGGACAAAGCCTCGATGCCCAGCTAAAGGCATTGATGAGCTGCGA
CAAAGTGTTTCAAGAAAAGGTAAGTGGTGCAAAGGATGACCGCCCACAACTGCAACTCATGCTCGAGTTTGTCAGAGAGG
GTGACATTGTGATTGTCACGAAGCTCGACAGGCTTGCTCGTAACACTCGTCACTTATTGGAGATAGCTGAGTTCTTAGCC
AAGAAACAGGTTTCACTGCAAATCCAGAATCTCGGCATAGATACAGCAACCCCAACAGGCAAGCTCATGCTGACTATGGT
TGGTGCCATCGCAACATTTGAGCGAGAGCTGATGTTAGAGCGGCAAGCGGAAGGGATAGCTCTCGCAAAACAGCGGGGAA
AATATAAAGGACGTAAACCCACGGCAATCACTAAGGCGAAAGAAGCAGCCCCATTGCTTGCGGAAGGTTTACCTAAGCCA
GAAGTGGCTAAGAGGCTGAATATCAGCTTGTCTAGCGTTCAACGGATAGCAAAACAATTAACATCTAAGGATTAG

Protein sequence :
MAEIGYARVSTTGQSLDAQLKALMSCDKVFQEKVSGAKDDRPQLQLMLEFVREGDIVIVTKLDRLARNTRHLLEIAEFLA
KKQVSLQIQNLGIDTATPTGKLMLTMVGAIATFERELMLERQAEGIALAKQRGKYKGRKPTAITKAKEAAPLLAEGLPKP
EVAKRLNISLSSVQRIAKQLTSKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-24 46
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-24 46
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-24 46
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 1e-25 44
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-23 42
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 7e-21 42
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 5e-21 42
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 5e-21 42
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 5e-21 42
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 5e-21 42
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 7e-21 42
res YP_005124341.1 DNA-invertase Not tested Not named Protein 4e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_2200 YP_963581.1 resolvase domain-containing protein VFG1030 Protein 7e-25 46