Gene Information

Name : Sputw3181_0214 (Sputw3181_0214)
Accession : YP_961620.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 236319 - 237839 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase

DNA sequence : 
ATGATTTATGCTCAACCCGGAACCGCAGGCGCAATCGTTAACTTCAAAGAAAAATATGCCAACTTTATCGGTGGTAAATG
GATCGCCCCAGTCAATGGTAAATACTTCGACAATCGCTCTCCCGTGAATGGCCAAAACTTTTGCCAAATCCCACGCTCCG
ATGCCCAAGATATTGAATTAGCCTTAGATGCCGCTCACGCAGCGAAAGAAGCATGGGGTAAAACCTCAGTTACCGAACGC
TCAAACCTGTTACTGCGCATTGCCGATCGGGTCGAACAAAATCTCGAATATTTAGCCGTAGCCGAAACCTGGGAAAACGG
TAAAGCGGTGCGTGAAACCTTAAACGCCGACTTGCCCTTATTCGTCGATCACTTCCGCTACTTTGCTGGTTGTATCCGCG
CACAGGAAGGCAGCGCCGCCGATATTGATGGCAACACAGTCAGTTATCACTTCCCAGAGCCTTTAGGCGTGGTCGGCCAG
ATCATTCCTTGGAACTTCCCGCTCTTAATGGCGGCATGGAAAATCGCCCCTGCGCTGGCGGCTGGTAACTGTGTGGTACT
CAAGCCTGCAGAGCAAACACCGGTATCGATTTTGGTCTTGCTCGAACTGATTGAAGACCTATTACCCGCGGGTATTCTTA
ACGTAGTCAACGGCTTTGGCGCCGAAGCGGGACAAGCGCTCGCCACCAGCAAACGCATCGCTAAGCTTGCGTTTACGGGC
TCCACCGAAATTGGCTATCACATCTTAAAATGCGCCGCCGAATCCTTAATTCCATCGACCGTTGAGCTTGGCGGCAAGTC
GCCTAACGTGTTTTTTGCCGATGTGATGGACCATGAAGACGAATATTTAAATAAGGCCGTCGAAGGCATGTTGCTGGCCT
TCTTCAACCAAGGAGAAGTCTGTACGTGCCCATCTCGGGTGCTAGTCCAAGAATCGATTTTTGATCGCTTTATCGAAAAA
GTGCTCGCCCGTGCGCAAACCATTAAGCAAGGCGATCCCTTAGATACCGACACTCAAGTGGGCGCTCAAGCCTCTAAAGA
ACAGTTCGATAAGATCTTAAGTTACTTAGCCATAGGTAAGGCTGAAGGTGCAGAAGTGCTATTGGGAGGCACACTTTGCC
AACTCGATGGCGGCCAAAGTGAAGGTTATTACATCAGCCCAACCATTATGAAAGGCCACAATAAGATGCGTATCTTCCAA
GAAGAGATCTTCGGCCCCGTCATTTCGGTCACCACCTTTAAAGATGAAGCCGAAGCCTTAGCGATCGCGAACGATACTGA
GTACGGCCTAGGCGCTGGCGTGTGGACGCGGGACATGAACACGGCTCAACGTATGGGACGTGGCATTCAAGCGGGCCGCG
TGTGGATTAACTGTTACCACGCCTATCCTGCCCATGCCGCCTTTGGTGGTTACAAAAAATCCGGCATCGGCCGCGAAACC
CATAAGATGATGCTCAACCATTATCAAAATACCAAGAATCTCTTGGTGAGTTACGATGTGAATCCTTTAGGTTTCTTCTA
A

Protein sequence : 
MIYAQPGTAGAIVNFKEKYANFIGGKWIAPVNGKYFDNRSPVNGQNFCQIPRSDAQDIELALDAAHAAKEAWGKTSVTER
SNLLLRIADRVEQNLEYLAVAETWENGKAVRETLNADLPLFVDHFRYFAGCIRAQEGSAADIDGNTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVLLELIEDLLPAGILNVVNGFGAEAGQALATSKRIAKLAFTG
STEIGYHILKCAAESLIPSTVELGGKSPNVFFADVMDHEDEYLNKAVEGMLLAFFNQGEVCTCPSRVLVQESIFDRFIEK
VLARAQTIKQGDPLDTDTQVGAQASKEQFDKILSYLAIGKAEGAEVLLGGTLCQLDGGQSEGYYISPTIMKGHNKMRIFQ
EEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNTAQRMGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLNHYQNTKNLLVSYDVNPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-164 71
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-173 70
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-173 70
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-173 70
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-172 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_0214 YP_961620.1 aldehyde dehydrogenase VFG0082 Protein 2e-164 71