|
Name : Sputw3181_2086 (Sputw3181_2086) Accession : YP_963468.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2398937 - 2401057 bp Length : 2121 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCCAGTTCAAACCAAAACCTAGCTATAGCTGCCAATGCTATAGAAATCACAGCGCCAGAATCGACAATCCTTAATAA ATCGGCTGAGTCTCGTCAATCAACAGTGCCTAAGGCGCCGAGTCGCCGCGAAACCCGCGCGCAGGCCCAAGCCTTTATTG ATACGTTAGCGCCACTGCAACATCCTAATTCACAAAAGATTTATCTTGAAGGTTCAAGTGCCGATATTCGCGTTGGTATG CGACAAATTATGCAGACTGATACGCTGGTGGGCGGTACAGCTGATGCGCCTATCATGGAAAAAAATCCGCCAATCCACGT GTACGATTGCGCCGGACCTTATTCCGATCCTGAGGCCGATATCAATGTGCGTCTCGGCCTTGTTAAATTAAGACAAAACT GGATCCTAGCCCGCAAGGATACAGAGCAATTACCCTGTGCCACCTCAGACTTTACCCAACAAAGACTCGCCGATGATGGT TTAGATCATCTGCGTTTTGAGGCGGGTTCGAGTGCGATTGTCCGCCCACGCAGAGCGCTGCAGGGTAAACGCGTCAGTCA ATTACACTATGCCCGTCAAGGGATTATCACGCCCGAAATGGAATATGTGGCGATCCGCGAGAATATGGCACTCGCCGAAG TACAGGATGAAATCCTCAATCGTAAAGCCAAGGGCGAAGCCTTTGGTGCCTTAGTTGGTGAGCCGATTACCGCCGAATTT GTCCGCGCCGAAGTTGCCCGTGGCCGCGCGATTATCCCGCTGAATATTAACCATCCCGAAGCCGAACCTATGATTATCGG GCGTAATTTTCTGGTGAAAGTGAACGCCAATATCGGTAACTCGGCGGTGACGTCTTCCATCGAGGAAGAAGTGGAAAAGC TCGTCTGGTCAACCCGTTGGGGTGCAGATACTGTCATGGATTTATCCACGGGTCGTTATATTCACGAAACCCGCGAGTGG ATCATCCGCAACTCGCCCGTGCCCATCGGCACAGTGCCGATTTATCAAGCACTGGAGAAAGTGAACGGCGTAGCAGAGGA TTTAACCTGGGAAGTGTTTCGCGATACCTTGATTGAACAAGCGGAGCAAGGTGTTGATTACTTTACGATTCATGCTGGTG TACTGCTGCGTTATGTGCAGATGACGGCTAAACGCGTTACTGGGATCGTTTCCCGCGGCGGTTCAATCATGGCCAAATGG TGCTTGAGCCATCATAAGGAAAACTTCCTCTACAGCCATTTTCGTGAGATCTGTGAGCTTTGCGTTGCCTACGATGTATC CCTGTCTTTAGGTGATGGTATGCGTCCAGGCTCGATTGCCGACGCTAATGATGCCGCCCAGTTTGCAGAGCTTGAAACCT TAGGTGAGCTAGTCAAAATCGCATGGGAATACGACGTGCAAACCATTATCGAAGGGCCGGGACATATCCCGATGCAGCTC ATTAAAGAGAACATGGACAAGCAGTTAGTTCATTGCGATGAAGCGCCGTTTTACACCCTTGGCCCGCAAATCACCGATAT CGCACCTGGGTATGATCATTTCACCTCCGGCATAGGCGCGGCCATGATCGCTTGGTACGGCTGCGCCATGTTGTGTTATG TAACACCAAAAGAACACTTAGGATTACCGAATAAACAAGATGTTAAGCAAGGTTTGATTGCTTACAAGATTGCCGCCCAT GCCGCCGATGTGGCCAAAGGTCATCCGAGTGCGCAAATTCGTGATAATGCGCTGGCAAAGGCGCGGTTCGAATTCCGCTG GGAAGATCAATATAACCTAGGGCTCGATCCTGACACCGCTCGGGCTTACCACGATGAGTCCTTACCACAGGAATCGGCCA AAGTCGCGCATTTTTGTTCTATGTGCGGCCCTAAATTTTGTTCGATGAAAATCACCCAAGATGTGCGCGCCTATGCCGCA GGTTTAGAGGCGGCACAAACGAAGGCAGAGCAAGTTGAAGCGGCTGCCCAAGCCATGCAAGTCACTATCAAGACGCCGCA GGAGTTGGAAGCGGCCATGGCACTAAAATCGGCACAATTTGCCGCTTCGGGCGCCGAGATTTATCAGGTGATAGACAAGC ATGTAAAAGACAAGCTCGTCGCCGAAGCTGAGGAAGCCTAA Protein sequence : MSSSNQNLAIAANAIEITAPESTILNKSAESRQSTVPKAPSRRETRAQAQAFIDTLAPLQHPNSQKIYLEGSSADIRVGM RQIMQTDTLVGGTADAPIMEKNPPIHVYDCAGPYSDPEADINVRLGLVKLRQNWILARKDTEQLPCATSDFTQQRLADDG LDHLRFEAGSSAIVRPRRALQGKRVSQLHYARQGIITPEMEYVAIRENMALAEVQDEILNRKAKGEAFGALVGEPITAEF VRAEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREW IIRNSPVPIGTVPIYQALEKVNGVAEDLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVQMTAKRVTGIVSRGGSIMAKW CLSHHKENFLYSHFREICELCVAYDVSLSLGDGMRPGSIADANDAAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQL IKENMDKQLVHCDEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAH AADVAKGHPSAQIRDNALAKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRAYAA GLEAAQTKAEQVEAAAQAMQVTIKTPQELEAAMALKSAQFAASGAEIYQVIDKHVKDKLVAEAEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 71 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 71 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
