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Name : Sputw3181_2005 (Sputw3181_2005) Accession : YP_963393.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2322206 - 2323492 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATCCTAAATTTTTACGCAACGAATTAGCTGTTACCGCGGAGCGATTGGCCACTCGAGGCTTTATTTTAGATGT CGCTCATCTTACTCAATTAGAAGAAAAACGTAAGTCGTTGCAAGTGGCTACTGAAGAATTGCAAGCGGCGCGTAATGCCA TCTCTAAATCCATCGGACAAGCCAAAGCCCGCGGTGAAGATGTTGACGCGATCATGGCACAAGTGGGGGATTTAGGCTCT CAAGTCGATGCTAAAAAATTAGAGCTGGCAGCTGTATTGGAAGAAGTGAATGCGATTGCGATGTCCATGCCTAACCTGCC AGATGAATCTGCGCCAATTGGTGCCGATGAAACACAGAATGTCGAAGTACGCCGTTGGGGCACACCACGTAGTTTTGATT TCCCGATCAAAGATCATATTGACTTGGGCGAAGGCTTAAACGGTTTAGATTTTAAAAGCGCGGTTAAGATCACCGGCTCT CGTTTTATCGTAATGAAAGGCCAAATCGCCCGATTAAATCGCGCCTTAGGTCAGTTTATGTTGGATCTGCATACGACTGA GCACGGTTATACCGAAGCCTATGTGCCATTGCTGGTTAATGAAGCGAGTTTACTTGGCACAGGCCAATTGCCGAAGTTTG GTGAAGACTTATTCCATACCAAACCCGCCACCGAAGAAGGTCAAGGGTTAAGTTTGATCCCTACAGCAGAAGTGCCACTC ACTAACTTAGTGCGTGACAGTATAGTCGATGAAGACGAGTTACCGATTAAGCTAACAGCACATACCGCATGTTTCCGAAG CGAAGCAGGATCATACGGCAAAGATACCCGTGGTCTTATTCGTCAGCATCAATTCGATAAAGTTGAACTCGTTCAATTAG TCAAACCAGAAGACTCAATGGCTGCACTTGAAACGCTGACAAATCATGCCGAAACTGTACTGCAACGCTTAGGACTACCA TATCGTACAGTTGTGTTATGTACGGGTGATATGGGTTTTGGCTCAAGCAAGACTTATGACATCGAAGTCTGGTTACCAGG ACAAAATACCTACCGTGAAATTTCTTCTTGCTCAAACATGAAGGATTTCCAAGCCCGCCGTATGCAAGCGCGTTACCGTG TTAAAGCGGATAATAAACCCGCTTTGTTACACACATTAAATGGCTCTGGTTTGGCTGTTGGCCGTACCTTAGTGGCGATA TTAGAAAACTATCAGAATGCTGATGGCAGTGTGACTATACCAGAAGCATTGCGTTCTTATATGGGTGGGTTAACTCAAAT CGGTTAA Protein sequence : MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQAKARGEDVDAIMAQVGDLGS QVDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADETQNVEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGS RFIVMKGQIARLNRALGQFMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSMAALETLTNHAETVLQRLGLP YRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAI LENYQNADGSVTIPEALRSYMGGLTQIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-110 | 57 |
