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Name : Sputw3181_1890 (Sputw3181_1890) Accession : YP_963279.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 2171686 - 2173554 bp Length : 1869 bp Strand : - Note : PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis protein domain protein; KEGG: vvu:VV21623 methyl-accepting chemotaxis protein DNA sequence : ATGAAGTTCAGTCATAAGATTGTCGCCGCATCCTCTGCGTTACTTTTAGTGACAGTAACGCTACTCACAATAAAACAATA CTACTCCATCCAGAAGGAAATGCAGGCACAAGTCGAAGCCAGTGTCACTGAAATCGTTGATGGTGTAAGAAACACTGTTT CATCGGAAATAGAAGCACGTAAACAACTGGCAGCTTATACCACTAGCTTGATAGAGCAAGATCTCACCCCAGCCCACATC AGTAGCGTTATTACGCGTCCCACGGTCAAAAATGCATTTTTGCTTATCGGTTTCGGATACGAAAAGGATGGCACTAATAT TAATAATAATCCGAGTTGGGATCCCGGCGCTGGATGGGATCCAAGGGCGAGACCTTGGTATAAAGATGCAAAACAAGCCG ATAAATTGATCATCACAGCACCCTATCCTGACTCTGCCTCCGGTGAAATTCTTGTCTCTATCGCAACCCCCGTAAAAGAG AGCGGTCAATTTATTGGGGCAATTTTTTATGATGTTAGCCTTGTTGGATTAGCAACATTAGTCAATGAGGTGAAGCTATT CAACGCTGGATATGTGTTTATTGTTGCGCAGGATGGAACGACAATCGCCCACCCAGAAGAAAAGAGAAATGGTACTCCAA TGGCTGACTATCTGCCTAACATCAAAGTGATGGAACAACCTCAAAAAGTGAGTATTGACGGTAAAAACTTCACCTTAGAT TTCTCTAAAGTGGCAGGAGAAAACTGGTATGTCGGCGTTATCTTAGATGAAGATATTGCCTATGCCGCCGTAACAGATTT ACGCAATAGCTCTATTCTCTATACGGTTATCGCTTTACTTATCAGTATTACTGTACTTCTCCTACTCATCACAACTTTGA TGCGCCCATTGCAAACCTTGAATGATGCGATTCAAGATGTCGCTTCTGGAGAAGGTGATTTGACCCAACGTTTGAATACA AAAACCGATACTGAGTTTTCATCTTTAGCCATTAGTTTCAATACCTTCACTGCTAATCTTCAACAACTTATTATTGAATC TAAATCGATTGGTCGACTCATCCATCAGAGTTCAGAAATGACATCGGTAGAGTTACAACAATCAACTGATGCAATGAACT CGCAGCTACATGAACTCGAACAACTTGCCACCGCAATGCATGAAATGGCAACGACCTCAACAGATGTCGCACGCAATGCT CAGGGTGCAGCCTCTGCGGCCAAAGAAGCAGACGACGCCACCAGTGCAGGAACTCGCGTCGTTAGCGATACAACGAAGGC GATTAATGCCTTATCCTCCGAAATCGATATGGCAGTATCTGAAGTCAAAATCTTAGGATCTGCGACAGATAATATTGCGA CTATCTTAAAAGTCATTAACGATATCGCAGATCAAACCAATTTGTTGGCCTTAAATGCGGCAATTGAAGCTGCAAGGGCG GGAGATTCAGGGCGTGGCTTTGCCGTTGTAGCCGATGAAGTCAGAACTCTCGCGCAAAAAACACAGCAATCGACAACACA AATCCGCAATATGATAGAACAACTTCAGCAAGGAGCCCGAGCCGTGGCAGAAGTGATGCACCAAAGTAAGGAAACCGCAA AAGATGCCGTTACCCGCGCCCAAGATGCTAACACTGCACTCGATAAGATCCGTGAAGCCATATTACAAATCACAGACATG AACCTACAAATTGCTTCTGCGGCTGAAGAACAAAGTCTCGTTGCCGAAGAAATAAACAGTAATACAATTAGGATCAAAGA TTTATCTGTCCAAGTTTCAGACACGGCCATTCGTGCTAACTCTGCAATGCATACACAAACGCAACATATCAAAGAACAAG ACGCAATCCTGAATAAATTTATCGTCTAA Protein sequence : MKFSHKIVAASSALLLVTVTLLTIKQYYSIQKEMQAQVEASVTEIVDGVRNTVSSEIEARKQLAAYTTSLIEQDLTPAHI SSVITRPTVKNAFLLIGFGYEKDGTNINNNPSWDPGAGWDPRARPWYKDAKQADKLIITAPYPDSASGEILVSIATPVKE SGQFIGAIFYDVSLVGLATLVNEVKLFNAGYVFIVAQDGTTIAHPEEKRNGTPMADYLPNIKVMEQPQKVSIDGKNFTLD FSKVAGENWYVGVILDEDIAYAAVTDLRNSSILYTVIALLISITVLLLLITTLMRPLQTLNDAIQDVASGEGDLTQRLNT KTDTEFSSLAISFNTFTANLQQLIIESKSIGRLIHQSSEMTSVELQQSTDAMNSQLHELEQLATAMHEMATTSTDVARNA QGAASAAKEADDATSAGTRVVSDTTKAINALSSEIDMAVSEVKILGSATDNIATILKVINDIADQTNLLALNAAIEAARA GDSGRGFAVVADEVRTLAQKTQQSTTQIRNMIEQLQQGARAVAEVMHQSKETAKDAVTRAQDANTALDKIREAILQITDM NLQIASAAEEQSLVAEEINSNTIRIKDLSVQVSDTAIRANSAMHTQTQHIKEQDAILNKFIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 7e-97 | 45 |
