Gene Information

Name : Sputw3181_1617 (Sputw3181_1617)
Accession : YP_963008.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1843356 - 1844111 bp
Length : 756 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: she:Shewmr4_1479 ABC transporter related

DNA sequence : 
ATGTCTAACGTCATCTTAAAAAACAGTGCCATCAATGTGGTTAACCTCGAAAAATCAGTGATCACTCAGGAAGGAACGCT
CACTATCCTCAAGGGCATTAACTTAGATGTCAAGCAAGGCGAGAGTGTGGCGATTTTAGGACCCTCTGGATCGGGTAAAT
CCACCTTGCTTGGATTGCTCGCAGCACTTGATACGCCGACATCGGGTGAAATTTGGCTCGATGGCGTGGCGTTATCGCCA
CTCAATGAAGAGCAAAAAGCGGCACTACGTAAACAGAAAGTGAGCTTTATTTTTCAATCTTTTATGTTGGTTGATACCTT
AACAGCACTCGAAAATGTGATGTTACCCGCCGAACTCGCAGGGGTGAAAAATGCCAAGGAAAAAGCGCAGGCCATGTTAG
AAAGGGTGGGGTTATCCCACCGCTTGACCCATTTACCCAAACAGCTTTCGGGTGGGGAGCAGCAAAGGGTCGCGATAGCC
CGTGCTTTTATCTGTGAGCCAACAGTGCTGTTTGCCGATGAACCTACGGGGAATTTAGATGGTGTTAACGGCCATAAGAT
CGCCGATATGTTATTTGAGCTCAATCAAGAAAGTCATACCACCTTAATTCTTGTCACCCATGATCTGTTACTTGCTAAAC
GCTGCCAGCGGCAGTTGGTGATGGATAATGGCCATTTACAGGAAGATAACGCCAGAGCTGTTGTCTCAACCCCATCCGTT
GCTCCCGATATACTCGCTAATGCTAAGGAGGCTTAA

Protein sequence : 
MSNVILKNSAINVVNLEKSVITQEGTLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTSGEIWLDGVALSP
LNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGVKNAKEKAQAMLERVGLSHRLTHLPKQLSGGEQQRVAIA
RAFICEPTVLFADEPTGNLDGVNGHKIADMLFELNQESHTTLILVTHDLLLAKRCQRQLVMDNGHLQEDNARAVVSTPSV
APDILANAKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-25 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_1617 YP_963008.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-33 48
Sputw3181_1617 YP_963008.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-32 43