Gene Information

Name : Sputw3181_1470 (Sputw3181_1470)
Accession : YP_962866.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Resistance
Product : hexapaptide repeat-containing transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1660805 - 1661419 bp
Length : 615 bp
Strand : +
Note : PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN4077 chloramphenicol acetyltransferase

DNA sequence : 
ATGTTTTTTTATTTATTGAAGATGTTTAAAGTTAAATTTTTTTCATCAAGAAATCAAAGACTAAATGATCGTATAACTAC
GATCAGGGGGGAGGGAACTTATGGTCCAGAGCCAAAATTAATTGGGCCTCATAATGTTGTAGAACAATTGCATTTTGGGA
GTTCAATTGGGAAGTATTGCTCTATAGCGGCCGGAATTAAGTTTTTATTTAGAGGTAAACACAATACGAATTGGGTTTCT
ACTTATCCATTCCAAGTAATGATGGGGTTAGATGTTCCTTTAAATGATTTAACACTTCATGCTCCCGTGAAAATTGGTAA
TGATGTCTGGATTGCTACTAATGTAAAAATTATGCAAGGTGTCACTATCGGTGATGGCGCTATAATCGCACAAGAGTCGT
TAGTGACTAAAGATGTTCCTCCATATGCGATTGTTGGTGGAAATCCAGCAAGAATTATAAGATATCGGTTTGAACCTGAT
GAAATTCAAGAATTATTAAATTTACAATGGTGGAATCTACCAAAAAACAAAATTGTGTTGATAGCAAAATATCTAACATC
ACAGGATGTAAATGAGTGCATAAAACAAATAAAAATGGTGAAAGATAATGAATAA

Protein sequence : 
MFFYLLKMFKVKFFSSRNQRLNDRITTIRGEGTYGPEPKLIGPHNVVEQLHFGSSIGKYCSIAAGIKFLFRGKHNTNWVS
TYPFQVMMGLDVPLNDLTLHAPVKIGNDVWIATNVKIMQGVTIGDGAIIAQESLVTKDVPPYAIVGGNPARIIRYRFEPD
EIQELLNLQWWNLPKNKIVLIAKYLTSQDVNECIKQIKMVKDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 7e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_1470 YP_962866.1 hexapaptide repeat-containing transferase AY123251.gene2.p01 Protein 2e-25 42
Sputw3181_1470 YP_962866.1 hexapaptide repeat-containing transferase NC_002516.2.878374.p Protein 2e-25 42