Gene Information

Name : Sputw3181_0144 (Sputw3181_0144)
Accession : YP_961551.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 173902 - 174453 bp
Length : 552 bp
Strand : +
Note : KEGG: shm:Shewmr7_0182 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain pro

DNA sequence : 
ATGACTGAAGCTAAAGAAGCTAAAAAAAGATGGTATGTAGTGCAGGCATTCTCAGGCTATGAAGGCCGAGTTTGTAAGTC
ACTGATTGAATACATTAAGATGCACGGCATGGAGCAGTACTTCGGTGAAGTATTAGTTCCGACTGAAGAAGTTATCGAAA
TGCGTGCAGGTCAGCGTCGTAAGAGTGAGCGTAAGTTTTTCCCTGGTTATGTGTTAGTCCAGATGGAAATGAACGATGAC
AGCTGGCATTTAGTCAAAAGCATCCCGCGTGTTTTAGGCTTTATTGGCGGAACCTCTGATCGTCCTGCCCCAATTTCAGA
TAAAGAAGCCGATGCTATTTTGCGTCGCTTGCAAGAAACCACGGCTTCACCAACTCACCGTGTTATTTTCGAACCGGGCG
AAGTGGTGCGTGTCTGTGACGGTCCATTCGCTGACTTTAACGGTACCGTTGAAGAAGTGGACTACGACAAGAGCCGCGTA
AAAGTGTCAGTAATGATCTTTGGTCGTTCTACACCAGTGGAGCTCGATTTTAGTCAGGTTGAAAAAGGCTGA

Protein sequence : 
MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERKFFPGYVLVQMEMNDD
SWHLVKSIPRVLGFIGGTSDRPAPISDKEADAILRRLQETTASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRV
KVSVMIFGRSTPVELDFSQVEKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-54 61
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-54 61