|
Name : fliP (Sputw3181_1437) Accession : YP_962834.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1623662 - 1624408 bp Length : 747 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGACAAAGTACAGTTTCCCATTAATCGGGCTTGCCATTTTATTTTTTAGTGTATCGGTCGGGGCGGCAGATGGTGTGTT GCCTGCGGTCACCGTAAAAACGGCTGCCGATGGTTCGACAGAGTATTCAGTGACAATGCAGATTCTACTGCTGATGACGT CACTGAGTTTTTTGCCAGCCATGGTGATTATGCTGACCTCGTTTACACGGATTATTGTGGTACTTTCTATTTTACGCCAA GCGATTGGATTGCAGCAGACGCCTTCTAACCAAGTGCTTATTGGGATGAGTCTCTTTATGACTTTTTTTATTATGGCGCC CGTGTTTGACAAAATTTATGATCAAGGTGTTAAACCCTATATCGATGAACAACTGACGCTACAGCAAGCTTTTGATAAGG GGAAAGAACCATTACGAGCTTTTATGCTAGGCCAAGTTCGTACGACAGATTTAAAAACCTTTATTGATATTTCTGGCTAT CAAAATATTAACTCGCCAGAAGAGGCTCCGATGAGCGTACTTGTGCCTGCTTTTATTACCAGTGAACTCAAAACGGCCTT TCAAATTGGCTTTATGTTATTCGTGCCTTTTTTGGTATTAGATTTAGTAGTGGCGAGTATTTTGATGGCGATGGGGATGA TGATGCTATCGCCGATGATAGTCTCATTGCCATTTAAGATTATGTTATTTGTGCTCGTTGATGGTTGGGGGCTTGTGTTA GGCACCTTAGCCAATAGTTTTGGTTAG Protein sequence : MTKYSFPLIGLAILFFSVSVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFLPAMVIMLTSFTRIIVVLSILRQ AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVL GTLANSFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 7e-15 | 43 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 7e-15 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 7e-15 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-16 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-16 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_962834.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 3e-57 | 66 |
| fliP | YP_962834.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-50 | 61 |
| fliP | YP_962834.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 7e-51 | 58 |
| fliP | YP_962834.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 5e-48 | 54 |
| fliP | YP_962834.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 7e-17 | 41 |
