Gene Information

Name : Sputw3181_1296 (Sputw3181_1296)
Accession : YP_962693.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1480337 - 1481290 bp
Length : 954 bp
Strand : +
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: shm:Shewmr7_1234 protein of unknown function DUF1722

DNA sequence :
ATGTATAAGTTTAACCCGCAGCGAATTCAGATTGGGATCAGTGCTTGTCTATTGGGTGAAAAAGTTCGCTTCGATGGGGG
GCACAAAAATTCTTCCTATTGTAATCAAGAGATTAAAAATTTTTTTGATTATGTTCCCATTTGTCCTGAGATGGCGATTG
GTCTAGGTGCACCTCGTAAAAGCATACGTTTAGTGCGTGATGGTGAAACCATACTTGTTCAAAGCGGCGATGGTAGCTTA
GATGTCACCGACAGACTGAATGCTTACAGTGAAAGCAAAGTACAAGAGCTAGATTTTTTAGGGGGATACTTGCTCTGTGC
TAAATCGCCTACATGCGGTATGGAACGGGTGACTGAGTACAAAATAGGCACGAATAACGGCACAAAATCGGGTATCGGTG
TGTTTGCTCGCAAGTTAATGGAGCGTTATCCATTACTACCCGTGGAGGAGGAGGGGCGCTTACACGATATGGTATTGCGG
GAAAACTTTTTTACCCGCGTTTATGCCTATCACGATTGGCACCAAATGAAGCACGAAGGATTAACTAAGCATAAATTGGT
TAAGTTTCACTCCCGTTATAAATATCTGCTCATGGCCCACAGCCCTAAATGGTATCGCGAGCTAGGACCTATTATTGCCA
ATATTGATGATCTTGAAACCAGTGCGACTCGCTATTTTGAAGGCTTTATGACGGCACTTAAAATTAATGCGACTCGTAAG
AATCACACCAGCACGTTACAGCATATTCAAGGTTATTTTAAAAAGCATTTGAGCAAAGAGCAAAAGACAGAACTATCTGA
AGCGATTATGAAATATCGACAAGGCTTCTTGCCATTATTGGTGCCTATTACCTTGATAAATCATTATCTGCGGGAATTTC
CAACCCCCTATATTGAAGACCAAGTGTATTTGAATCCTCATCCTGAGGCGTTAAAACTGCGTTACGCATATTAA

Protein sequence :
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIKNFFDYVPICPEMAIGLGAPRKSIRLVRDGETILVQSGDGSL
DVTDRLNAYSESKVQELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGTKSGIGVFARKLMERYPLLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHQMKHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIIANIDDLETSATRYFEGFMTALKINATRK
NHTSTLQHIQGYFKKHLSKEQKTELSEAIMKYRQGFLPLLVPITLINHYLREFPTPYIEDQVYLNPHPEALKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 3e-71 47
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 3e-71 47
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-71 47
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-71 47
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_1296 YP_962693.1 hypothetical protein VFG0490 Protein 1e-71 47