Gene Information

Name : Sputw3181_1170 (Sputw3181_1170)
Accession : YP_962567.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1321291 - 1321755 bp
Length : 465 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: sde:Sde_1961 putative transcriptional regulator, MerR family

DNA sequence : 
ATGAAACCTAGTTTAAACTCTGTAGTTACTATAGAGTCAATAGGCAGTATCGAGATGATCAAGATTGGAGAGCTGGCAAA
AATCTCTGGCTGTTCTGTGCAAACCATCCGTCACTATGAAAAGGAGCAGCTTCTTGCGGCGAAACTACGTAGCGATGGTA
ATTTCCGCCTCTACGATCACGCTGATATCGAGCGGTTGCTATTTATTAAACACTGCCGGAGTTTAGATCTGAGTTTGGCA
GAAATTCGTCAGTTACTGAGTTTGAATGACTCGCCAATGTCGCAGTGTGATGATGTTAATCAGATGATTGAACAGCATAT
CGAGCAGGTAGAACGTCGCATAGCGGATTTAACGCAGCTTAATAAACAACTAAAGGCTTTACGTCTTAGCTGCAACTCGA
AGCGCACGGTAGAGCACTGTGGTATTTTAAAACAATTGAATGAAGCCGTTAGTCAAACCAACTAA

Protein sequence : 
MKPSLNSVVTIESIGSIEMIKIGELAKISGCSVQTIRHYEKEQLLAAKLRSDGNFRLYDHADIERLLFIKHCRSLDLSLA
EIRQLLSLNDSPMSQCDDVNQMIEQHIEQVERRIADLTQLNKQLKALRLSCNSKRTVEHCGILKQLNEAVSQTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-32 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-26 44
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 6e-27 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-26 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-26 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-27 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-27 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-27 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_1170 YP_962567.1 MerR family transcriptional regulator BAC0058 Protein 1e-33 53
Sputw3181_1170 YP_962567.1 MerR family transcriptional regulator BAC0301 Protein 2e-27 48