Gene Information

Name : Sputw3181_1128 (Sputw3181_1128)
Accession : YP_962529.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1278222 - 1278506 bp
Length : 285 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: ssn:SSO_P025 IS3 ORF1

DNA sequence : 
ATGACAACCCAAAAGACCCGCAAGACTCACACTGCTGAATTTAAAGCAGAAGCCCTTAAACTAGCCGAACGTGTCGGTGT
TGCTGAAGCGGCTAGGCAACTCAAAATCTACGAATCACAACTTTATAACTGGCGCTCTGCCATTGAAAAGAAATCGACAA
CCAGCCAACGCGAAGCAGAACTTGCTGCTGAAGTTGCCAAGTTAAAACGCCAGTTAGCTGACCAAGCCGAGGATTTAGCC
ATCCTAAAAAAGGCGGCCACCTACTTCGCGAAGAATCAAAAGTAA

Protein sequence : 
MTTQKTRKTHTAEFKAEALKLAERVGVAEAARQLKIYESQLYNWRSAIEKKSTTSQREAELAAEVAKLKRQLADQAEDLA
ILKKAATYFAKNQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 5e-13 65
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 5e-13 65
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-12 65
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-12 65
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 3e-14 63
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 3e-14 63
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 3e-14 63
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 4e-14 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_1128 YP_962529.1 transposase IS3/IS911 family protein VFG1632 Protein 8e-13 65
Sputw3181_1128 YP_962529.1 transposase IS3/IS911 family protein VFG0603 Protein 1e-13 65