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Name : Sputw3181_1116 (Sputw3181_1116) Accession : YP_962519.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1265548 - 1267053 bp Length : 1506 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: ecc:c5144 hypothetical protein DNA sequence : GTGTCGGGCAAACCCATCACAGATCAACAAATCAGGTTATATGTGAATGAACGTAAACAAGGTCAAACCCAGCTTGCCGC TTCGGCAAAGTCTGGTTTATCAGAGCGATCAGGTCGCCGCATAGACAGCGGTGAACTGAACACAGAACCAACCCCCAAGC GTCAATGGCGCACTCGCAAAGACCCGCTTGCTGAGGTCTGGTCATCGGTGCTGGTACCACTACTCGAAGCGAACCCTGAA CTATTGCCGCTCACGTTGTTTGAATACCTTCACGACAACTACCCCAATCAGTATGACAACACCGTACTGCGCACGTTGCA GCGACGTGTCAAAGCATGGAAGGTCAAACATGGCCCCGCAAAGGAAGTCATGTTCCGCCAAACTAAAGTGCCTGGGCGTT TGGGTTTATCGGACTTCACGCTCTTGAAAGGGGTTACGATTACAATACTTGGGCAGGTATTTTGCCATTTGCTATACCAC TATCGCCTTGCCTTTAGCGGCTGGACGTACGCCAAAGTCATTTGCGGTGGTGAAAGCTATACCGCCTTGTCTACAGGGCT TCAGAATGCCTTATGGCGCAGTGGTGGCGCACCCCTTGAACACCGCACCGACAGCTTGAGTGCCGCCTTTAACAATCTGG CCGAGAAGGAACAGCTTACCGTTCGGTACGACGCCTTATGCCACCACTATCAACTCAAAGGCAGTCGTAACAACCCCGGC AAGAGCCATGAGAACGGTACAATAGAAGCGGCACACGGGCATTTAAAGCGACGTATGACTCAGGCCTTGCTGCTGCGAGG CGATACTGATTTTACGTCCCTTGAGGCCTATCAAGCCTTCGTGGATGGTATTGTCACCAAGATTAACCAGCAATGCCGCA CCCGCTTTGAACAAGAGCGGCCGTTATTGCAGACACTGCCAAAACGGCGCACTCATGATTATGCGGAGCACAGTGTTCTG ATTAGCAGCAGTAGCAGCTTTGACCTCAAACGGGTGACCTATACCGTACCGTCTCGCTTTATCGGCGAGCGGCTGTATGT TCAGCTGTATGACGAGCGCTTGGATCTGTTCAGTGGGCATGAGCAGATACTCAGCTTACCGCGTGTTTATGCCACCACAA CCCAGCGCGGACGCAGTGTCGATTATCGCCATGTTATCGACTCCTTGGTTAAAAAGCCGGGGGCCTTCCGTTACTCGCAG CTGCGCGATGACTTATTACCCACCCCGGACTACCACCGTATCTGGCAGTATGTTGACGGCACACTGAATCCCCATGATGC CTGCCGTTACATCGTGCGCCTGCTGCACTTGGCCGCGACAGCTCAGTGCCAAGATAGCCTTGGTCGTTACGTACTCAAAA GCATTGAGGGGGGTGAATTACCCAGCAACTTACAGTGCAATAAGCGCTTTAGTACAGACACGGCCGTGATTCCACTCATT ACGGCAAAGCAGCACCTGCTGGCTGATTACGATCAGCTGTTATGTGTGGAGGTGCAACATGGCTGA Protein sequence : MSGKPITDQQIRLYVNERKQGQTQLAASAKSGLSERSGRRIDSGELNTEPTPKRQWRTRKDPLAEVWSSVLVPLLEANPE LLPLTLFEYLHDNYPNQYDNTVLRTLQRRVKAWKVKHGPAKEVMFRQTKVPGRLGLSDFTLLKGVTITILGQVFCHLLYH YRLAFSGWTYAKVICGGESYTALSTGLQNALWRSGGAPLEHRTDSLSAAFNNLAEKEQLTVRYDALCHHYQLKGSRNNPG KSHENGTIEAAHGHLKRRMTQALLLRGDTDFTSLEAYQAFVDGIVTKINQQCRTRFEQERPLLQTLPKRRTHDYAEHSVL ISSSSSFDLKRVTYTVPSRFIGERLYVQLYDERLDLFSGHEQILSLPRVYATTTQRGRSVDYRHVIDSLVKKPGAFRYSQ LRDDLLPTPDYHRIWQYVDGTLNPHDACRYIVRLLHLAATAQCQDSLGRYVLKSIEGGELPSNLQCNKRFSTDTAVIPLI TAKQHLLADYDQLLCVEVQHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| r6 | AAC61728.1 | transposase R6 | Not tested | PAI I CFT073 | Protein | 2e-96 | 47 |
| unnamed | AAL67386.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 2e-96 | 47 |
| unnamed | AAL67341.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 9e-97 | 47 |
| c3607 | NP_755482.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-97 | 47 |
| c5144 | NP_756992.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 1e-97 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputw3181_1116 | YP_962519.1 | integrase catalytic subunit | VFG1728 | Protein | 6e-98 | 47 |
